RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 HJURPQ8NCD3 748 aaPredicted RBP13.27□□□□□ -0.28
CCDC7-202ENST00000302316 MCUQ8NE86 351 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.28
CCDC7-202ENST00000302316 IL12RB2Q99665 862 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 MED4Q9NPJ6 270 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 EIF2B3Q9NR50 452 aaKnown RBP13.27□□□□□ -0.28
CCDC7-202ENST00000302316 OGFRQ9NZT2 677 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 NFS1Q9Y697 457 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.27□□□□□ -0.29
CCDC7-202ENST00000302316 E7ESA3 106 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 H3BQF6 201 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 J3KR12 359 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 ZNF197O14709 1029 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 OPA1O60313 960 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 RHOCP08134 193 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 SARNPP82979 210 aaKnown RBP13.27□□□□□ -0.29
CCDC7-202ENST00000302316 ZNF177Q13360 481 aaPredicted RBP13.27□□□□□ -0.29
CCDC7-202ENST00000302316 CEP85LQ5SZL2 805 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 TMC5Q6UXY8 1006 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 SH3RF2Q8TEC5 729 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 SMG7Q92540 1137 aaKnown RBP13.27□□□□□ -0.29
CCDC7-202ENST00000302316 MAML1Q92585 1016 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 TIFAQ96CG3 184 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 PABPC5Q96DU9 382 aaKnown RBP13.27□□□□□ -0.29
CCDC7-202ENST00000302316 TTC25Q96NG3 672 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 CCL26Q9Y258 94 aa13.27□□□□□ -0.29
CCDC7-202ENST00000302316 HELZP42694 1942 aaKnown RBP13.26□□□□□ -0.29
CCDC7-202ENST00000302316 ALOX15BO15296 676 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 TBL1XO60907 577 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 SHBGP04278 402 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 CEBPBP17676 345 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 BMP8BP34820 402 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 NUMBP49757 651 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 EIF3BP55884 814 aaKnown RBP13.26□□□□□ -0.29
CCDC7-202ENST00000302316 CDK16Q00536 496 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 GNA12Q03113 381 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 ZNF844Q08AG5 666 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 SERINC3Q13530 473 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 CAND1Q86VP6 1230 aaKnown RBP13.26□□□□□ -0.29
CCDC7-202ENST00000302316 FAM217AQ8IXS0 508 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 CNTD1Q8N815 330 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 VN1R2Q8NFZ6 395 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 PYROXD1Q8WU10 500 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 NSMCE1Q8WV22 266 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 ING5Q8WYH8 240 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 ARHGEF2Q92974 986 aaKnown RBP13.26□□□□□ -0.29
CCDC7-202ENST00000302316 PPP2R3CQ969Q6 453 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 MRPL38Q96DV4 380 aaKnown RBP13.26□□□□□ -0.29
CCDC7-202ENST00000302316 DOCK6Q96HP0 2047 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 ZNF419Q96HQ0 510 aaPredicted RBP13.26□□□□□ -0.29
CCDC7-202ENST00000302316 CDCA3Q99618 268 aaPredicted RBP13.26□□□□□ -0.29
CCDC7-202ENST00000302316 GORASP1Q9BQQ3 440 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 MAGEH1Q9H213 219 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 SFXN1Q9H9B4 322 aa13.26□□□□□ -0.29
CCDC7-202ENST00000302316 RBM22Q9NW64 420 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC7-202ENST00000302316 MRPS23Q9Y3D9 190 aaKnown RBP13.26□□□□□ -0.29
CCDC7-202ENST00000302316 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.26□□□□□ -0.29
CCDC7-202ENST00000302316 A0A0D9SEW6 157 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 GOLGA6L10A6NI86 522 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 AVILO75366 819 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 SYF2O95926 243 aaKnown RBP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 HLA-DQB2P05538 268 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 OAS2P29728 719 aaKnown RBP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 IL10RBQ08334 325 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 HNRNPDQ14103 355 aaKnown RBP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 PRPSAP1Q14558 356 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 IL31Q6EBC2 164 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 ZNF534Q76KX8 674 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 SETD3Q86TU7 594 aaPredicted RBP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 CARNMT1Q8N4J0 409 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 TDRD5Q8NAT2 981 aaKnown RBP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 FBXO36Q8NEA4 188 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 OR7D4Q8NG98 312 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 OR52K2Q8NGK3 314 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 BHMTQ93088 406 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 FATE1Q969F0 183 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 TMA16Q96EY4 203 aaKnown RBP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 SH3GL2Q99962 352 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 IGFLR1Q9H665 355 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 XAB2Q9HCS7 855 aaKnown RBP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 ZMYM5Q9UJ78 669 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 CHMP2BQ9UQN3 213 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 ILVBLA1L0T0 632 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 SOBPA7XYQ1 873 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 H0Y626 953 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 GFRA2O00451 464 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 PEX11BO96011 259 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 GRIA1P42261 906 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 RENBPP51606 427 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 DNAJC21Q5F1R6 531 aaKnown RBP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 MARC1Q5VT66 337 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 CAPN12Q6ZSI9 719 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 OTOP3Q7RTS5 596 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 CPXM2Q8N436 756 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 USP13Q92995 863 aaPredicted RBP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 WDR83Q9BRX9 315 aaKnown RBP13.25□□□□□ -0.29
CCDC7-202ENST00000302316 VPS37BQ9H9H4 285 aa13.25□□□□□ -0.29
CCDC7-202ENST00000302316 GLOD4Q9HC38 313 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms