RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 MDM1Q8TC05 714 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 CLP1Q92989 425 aaKnown RBP12.26□□□□□ -0.45
TPM3-202ENST00000302206 ALKBH8Q96BT7 664 aaKnown RBP12.26□□□□□ -0.45
TPM3-202ENST00000302206 ZNF512Q96ME7 567 aaPredicted RBP12.26□□□□□ -0.45
TPM3-202ENST00000302206 FCRL5Q96RD9 977 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 CEP41Q9BYV8 373 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 ZBP1Q9H171 429 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 TRABDQ9H4I3 376 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 NOL6Q9H6R4 1146 aaKnown RBP12.26□□□□□ -0.45
TPM3-202ENST00000302206 PLAC1Q9HBJ0 212 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 GLOD4Q9HC38 313 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 ZNF212Q9UDV6 495 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 TBK1Q9UHD2 729 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 VANGL2Q9ULK5 521 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 AAR2Q9Y312 384 aaKnown RBP12.26□□□□□ -0.45
TPM3-202ENST00000302206 ARIH1Q9Y4X5 557 aaPredicted RBP12.26□□□□□ -0.45
TPM3-202ENST00000302206 PTPRSQ13332 1948 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 IQANK1A0A1B0GTG1 560 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 TMEM120BA0PK00 339 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 MAGEB16A2A368 324 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 GMNCA6NCL1 334 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 FAM159BA6NKW6 160 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 PRRG1O14668 218 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 ACSL4O60488 711 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 ANXA9O76027 345 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 FGF18O76093 207 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 LATS1O95835 1130 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 INHBAP08476 426 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 LINC00271P0C7V0 271 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 CTSAP10619 480 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 KRT15P19012 456 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 NFKB1P19838 968 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 TACR2P21452 398 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 GRIA1P42261 906 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 SLC11A2P49281 568 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 HARS2P49590 506 aaKnown RBP12.25□□□□□ -0.45
TPM3-202ENST00000302206 PAPOLAP51003 745 aaKnown RBP12.25□□□□□ -0.45
TPM3-202ENST00000302206 EPHB3P54753 998 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 HNRNPDQ14103 355 aaKnown RBP12.25□□□□□ -0.45
TPM3-202ENST00000302206 TAF12Q16514 161 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 KBTBD12Q3ZCT8 623 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 PARP15Q460N3 678 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 SPANXN3Q5MJ09 141 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 SYCP2LQ5T4T6 812 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 RAP1GAP2Q684P5 730 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 TTC19Q6DKK2 380 aaPredicted RBP12.25□□□□□ -0.45
TPM3-202ENST00000302206 NAPEPLDQ6IQ20 393 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 C16orf59Q7L2K0 433 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 ITIH5Q86UX2 942 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 SLC26A11Q86WA9 606 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 LRRC6Q86X45 466 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 CCDC117Q8IWD4 279 aaPredicted RBP12.25□□□□□ -0.45
TPM3-202ENST00000302206 SRRM1Q8IYB3 904 aaKnown RBP12.25□□□□□ -0.45
TPM3-202ENST00000302206 CNTD1Q8N815 330 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
TPM3-202ENST00000302206 MZB1Q8WU39 189 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 DEPDC1BQ8WUY9 529 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 ARNTL2Q8WYA1 636 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 PSMG2Q969U7 264 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 TTC17Q96AE7 1141 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 SGSM3Q96HU1 749 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 AGAP3Q96P47 875 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 SMC6Q96SB8 1091 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 MLPHQ9BV36 600 aaPredicted RBP12.25□□□□□ -0.45
TPM3-202ENST00000302206 NKIRAS1Q9NYS0 192 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 MOCS1Q9NZB8 636 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 MPP6Q9NZW5 540 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 INSL6Q9Y581 213 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 INSL5Q9Y5Q6 135 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 MAD1L1Q9Y6D9 718 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 IKBKGQ9Y6K9 419 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 CHD9Q3L8U1 2897 aa12.25□□□□□ -0.45
TPM3-202ENST00000302206 TCF20Q9UGU0 1960 aaKnown RBP12.25□□□□□ -0.45
TPM3-202ENST00000302206 FAM47DPA6NHR8 397 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 F5H5T6 163 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 COCHO43405 550 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 OAS1P00973 400 aaKnown RBP12.24□□□□□ -0.45
TPM3-202ENST00000302206 CNTFP26441 200 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 MGAT1P26572 445 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 SERPINB9P50453 376 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 RENBPP51606 427 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 GEMP55040 296 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 TWF1Q12792 350 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 EFTUD2Q15029 972 aaKnown RBP eCLIP12.24□□□□□ -0.452e-18■■■■□ 20.8
TPM3-202ENST00000302206 ZSCAN26Q16670 478 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 PABPC1LQ4VXU2 614 aaKnown RBP12.24□□□□□ -0.45
TPM3-202ENST00000302206 LGSNQ5TDP6 509 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 TTC39BQ5VTQ0 682 aaPredicted RBP12.24□□□□□ -0.45
TPM3-202ENST00000302206 NADSYN1Q6IA69 706 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 PSRC1Q6PGN9 363 aaPredicted RBP12.24□□□□□ -0.45
TPM3-202ENST00000302206 ARHGAP36Q6ZRI8 547 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 MARK2Q7KZI7 788 aaKnown RBP12.24□□□□□ -0.45
TPM3-202ENST00000302206 OTOP2Q7RTS6 562 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 TMCO2Q7Z6W1 182 aaPredicted RBP12.24□□□□□ -0.45
TPM3-202ENST00000302206 CHSY1Q86X52 802 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 DOCK4Q8N1I0 1966 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 MPP5Q8N3R9 675 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 TEX26Q8N6G2 289 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 BCAS4Q8TDM0 211 aa12.24□□□□□ -0.45
TPM3-202ENST00000302206 IGSF8Q969P0 613 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms