RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 PAGE2BQ5JRK9 111 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 ICE2Q659A1 982 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 C11orf63Q6NUN7 778 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 PRUNE1Q86TP1 453 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 SLC13A5Q86YT5 568 aaPredicted RBP7.24□□□□□ -1.25
RAG1-201ENST00000299440 TOP6BLQ8N6T0 577 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 SUN3Q8TAQ9 357 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 CATSPERZQ9NTU4 200 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 SYBUQ9NX95 663 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 EVLQ9UI08 416 aaPredicted RBP7.24□□□□□ -1.25
RAG1-201ENST00000299440 CD84Q9UIB8 345 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 SNX6Q9UNH7 406 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 C2CD2Q9Y426 696 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 FFAR2O15552 330 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 FGF18O76093 207 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 PROSCO94903 275 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 GSNP06396 782 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 EARS2Q5JPH6 523 aaKnown RBP7.24□□□□□ -1.25
RAG1-201ENST00000299440 CDK20Q8IZL9 346 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 SPATA4Q8NEY3 305 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 NACC2Q96BF6 587 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 KRT84Q9NSB2 600 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 CACNG4Q9UBN1 327 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 NAALADL1Q9UQQ1 740 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 ZNF862O60290 1169 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 VPS4BO75351 444 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 EOMESO95936 686 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 PFKMP08237 780 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 MGAT1P26572 445 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 NTSP30990 170 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 SARSP49591 514 aaKnown RBP7.24□□□□□ -1.25
RAG1-201ENST00000299440 SERPINH1P50454 418 aaKnown RBP7.24□□□□□ -1.25
RAG1-201ENST00000299440 TOB1P50616 345 aaPredicted RBP7.24□□□□□ -1.25
RAG1-201ENST00000299440 ZSCAN26Q16670 478 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 METTL3Q86U44 580 aaKnown RBP7.24□□□□□ -1.25
RAG1-201ENST00000299440 NETO2Q8NC67 525 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 SH3RF2Q8TEC5 729 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 SIPA1Q96FS4 1042 aa7.24□□□□□ -1.25
RAG1-201ENST00000299440 RPL10LQ96L21 214 aaKnown RBP7.24□□□□□ -1.25
RAG1-201ENST00000299440 A8MU76 341 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 NRP1O14786 923 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 FTH1P02794 183 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 IDSP22304 550 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 SLC5A3P53794 718 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 COPZ1P61923 177 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 DLG4P78352 724 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ITGA9Q13797 1035 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 GNA13Q14344 377 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 KLHL5Q96PQ7 755 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 WDR27A2RRH5 827 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 HLA-DQA2P01906 255 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 MIPP30301 263 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 C1QBPQ07021 282 aaKnown RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 XKR4Q5GH76 650 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ANKS1BQ7Z6G8 1248 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 FBXO39Q8N4B4 442 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ANKRD52Q8NB46 1076 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ZSCAN1Q8NBB4 408 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ACTL9Q8TC94 416 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 IPCEF1Q8WWN9 437 aaPredicted RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 USP6NLQ92738 828 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 FAM84AQ96KN4 292 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 LRRC1Q9BTT6 524 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 GTF2IRD1Q9UHL9 959 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ACOT9Q9Y305 439 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ZSCAN5CA6NGD5 496 aaPredicted RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 SCN2BO60939 215 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 GUCY1B2O75343 617 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ZNF682O95780 498 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 JMJD7P0C870 316 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 CDH2P19022 906 aaPredicted RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 DGKAP23743 735 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 LSP1P33241 339 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ELP6Q0PNE2 266 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ATP13A4Q4VNC1 1196 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 HSP90AA5PQ58FG0 334 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 HIBCHQ6NVY1 386 aaPredicted RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 VSTM1Q6UX27 236 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 ELOA2Q8IYF1 753 aaPredicted RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 MCOLN2Q8IZK6 566 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 OR5B17Q8NGF7 314 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 RAD9AQ99638 391 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 PACSIN1Q9BY11 444 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 MCOLN1Q9GZU1 580 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 PIF1Q9H611 641 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 TMCC3Q9ULS5 477 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 H3BQ06 376 aaPredicted RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 GTPBP1O00178 669 aaKnown RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 PIK3CDO00329 1044 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 SYN3O14994 580 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 SEC22BO75396 215 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 CNPP09543 421 aaKnown RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 FAM228BP0C875 321 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 UQCRBP14927 111 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 SLC12A3P55017 1021 aa7.23□□□□□ -1.25
RAG1-201ENST00000299440 MRPS15P82914 257 aaKnown RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 OC90Q02509 493 aaPredicted RBP7.23□□□□□ -1.25
RAG1-201ENST00000299440 IRF8Q02556 426 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms