RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 MAGEA9P43362 315 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 SLC18A2Q05940 514 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 TRMT10BQ6PF06 316 aaKnown RBP9.34□□□□□ -0.91
PDPN-201ENST00000294489 C14orf80Q86SX3 495 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 UMODL1-AS1Q8N2C9 162 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 ATPAF2Q8N5M1 289 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 RTL3Q8N8U3 475 aaKnown RBP9.34□□□□□ -0.91
PDPN-201ENST00000294489 ATP6V0D2Q8N8Y2 350 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 DNAAF3Q8N9W5 541 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 APOPT1Q96IL0 206 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 TEKT5Q96M29 485 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 BFARQ9NZS9 450 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 MARCH2Q9P0N8 246 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 ZNF840PA6NDX5 716 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 CCT8L1PA6NM43 557 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 AP3B1O00203 1094 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 FAM155BO75949 473 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 ALDH1A2O94788 518 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 JCHAINP01591 159 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 FGBP02675 491 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 CSH1P0DML2 217 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 CSH2P0DML3 217 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 PYGBP11216 843 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 CNTFP26441 200 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 SF3A3Q12874 501 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDPN-201ENST00000294489 TMEM240Q5SV17 173 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 KCTD11Q693B1 232 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 GIPC2Q8TF65 315 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 HERVK_113Q902F9 699 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 SERAC1Q96JX3 654 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 KDM4CQ9H3R0 1056 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 ACTR5Q9H9F9 607 aaPredicted RBP9.34□□□□□ -0.91
PDPN-201ENST00000294489 TMEM248Q9NWD8 314 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 DONSONQ9NYP3 566 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 SSX2IPQ9Y2D8 614 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 YIPF1Q9Y548 306 aa9.34□□□□□ -0.91
PDPN-201ENST00000294489 NUP205Q92621 2012 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 COPEO14579 308 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 PSMD3O43242 534 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 OAS1P00973 400 aaKnown RBP9.34□□□□□ -0.92
PDPN-201ENST00000294489 CTSAP10619 480 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 RHOQP17081 205 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 CRADDP78560 199 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 FPGSQ05932 587 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 EFEMP1Q12805 493 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 ZBTB17Q13105 803 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 DNAJC3Q13217 504 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 NAB1Q13506 487 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 KIAA1841Q6NSI8 718 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 FAM47EQ6ZV65 393 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 PHOSPHO2Q8TCD6 241 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 PPM1EQ8WY54 764 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 TRIM56Q9BRZ2 755 aaKnown RBP9.34□□□□□ -0.92
PDPN-201ENST00000294489 VPS11Q9H270 941 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 NOL6Q9H6R4 1146 aaKnown RBP9.34□□□□□ -0.92
PDPN-201ENST00000294489 CCSER2Q9H7U1 834 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 LRRC40Q9H9A6 602 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 SMYD2Q9NRG4 433 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 PIH1D1Q9NWS0 290 aaKnown RBP9.34□□□□□ -0.92
PDPN-201ENST00000294489 KLHL14Q9P2G3 628 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 ARL2BPQ9Y2Y0 163 aa9.34□□□□□ -0.92
PDPN-201ENST00000294489 MAFKO60675 156 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 TBX18O95935 607 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 URODP06132 367 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 ALADP13716 330 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 NFKB1P19838 968 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 ADRA1DP25100 572 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 CD68P34810 354 aaPredicted RBP9.33□□□□□ -0.92
PDPN-201ENST00000294489 LIG3P49916 1009 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 NDST2P52849 883 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 CRYMQ14894 314 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 SPANXN3Q5MJ09 141 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 TIGD7Q6NT04 549 aaPredicted RBP9.33□□□□□ -0.92
PDPN-201ENST00000294489 TRPM8Q7Z2W7 1104 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 TMEM150AQ86TG1 271 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 OR52K1Q8NGK4 314 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 ARNTL2Q8WYA1 636 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 CCT6BQ92526 530 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 YME1L1Q96TA2 773 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 IL12RB2Q99665 862 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 SYBUQ9NX95 663 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 TXNDC16Q9P2K2 825 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 DNMT3LQ9UJW3 386 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 VANGL2Q9ULK5 521 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 PHTF1Q9UMS5 762 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 LZTS1Q9Y250 596 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 STARD13Q9Y3M8 1113 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 TLR5O60602 858 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 NEBLO76041 1014 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 FGF18O76093 207 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 C1RP00736 705 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 NEFHP12036 1026 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 CCNB1P14635 433 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 C10orf120Q5SQS8 335 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 SPOUT1Q5T280 376 aaKnown RBP9.33□□□□□ -0.92
PDPN-201ENST00000294489 NADSYN1Q6IA69 706 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 NAPEPLDQ6IQ20 393 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 LILRA6Q6PI73 481 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 MARK2Q7KZI7 788 aaKnown RBP9.33□□□□□ -0.92
PDPN-201ENST00000294489 OXNAD1Q96HP4 312 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms