RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RARAP10276 462 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 GSTT1P30711 240 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 SERPINH1P50454 418 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 SLC12A3P55017 1021 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 KCNT1Q5JUK3 1230 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 OR8H2Q8N162 312 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 FAM210AQ96ND0 272 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 GDF15Q99988 308 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 XPNPEP1Q9NQW7 623 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 UBAP1Q9NZ09 502 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 WWOXQ9NZC7 414 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 MCM8Q9UJA3 840 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 ADAM30Q9UKF2 790 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 STX7O15400 261 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 VPS26AO75436 327 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 PECAM1P16284 738 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 ELK3P41970 407 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 ADAM17P78536 824 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 ITGA9Q13797 1035 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 CYP51A1Q16850 503 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 SAMD4BQ5PRF9 694 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 N4BP2L1Q5TBK1 243 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 IL31Q6EBC2 164 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 ZNF662Q6ZS27 426 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 ZNF720Q7Z2F6 126 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 DHRSXQ8N5I4 330 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 SETD9Q8NE22 299 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 CBWD1Q9BRT8 395 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 SYTL2Q9HCH5 934 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 CYLDQ9NQC7 956 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 KAT6AQ92794 2004 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 MAGEB16A2A368 324 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 PSMB9P28065 219 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 TPP2P29144 1249 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 HOXC8P31273 242 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 GLRBP48167 497 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 C1DQ13901 141 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 INAQ16352 499 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 RORBQ92753 470 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 DUSP9Q99956 384 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 NDEL1Q9GZM8 345 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 NMRK1Q9NWW6 199 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 RNF112Q9ULX5 631 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 GIT1Q9Y2X7 761 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 ABLIM1O14639 778 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 EDIL3O43854 480 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 DDHD2O94830 711 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 GUCA1CO95843 209 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 RRM2P31350 389 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 WDR5P61964 334 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 CNGA2Q16280 664 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 IL17AQ16552 155 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 DGUOKQ16854 277 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 FAM45BPQ6NSW5 357 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 CCDC33Q8N5R6 958 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 KIAA0895Q8NCT3 520 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 OMA1Q96E52 524 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 OLFM1Q99784 485 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 COQ7Q99807 217 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 APOL5Q9BWW9 433 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 AVENQ9NQS1 362 aaPredicted RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 IARS2Q9NSE4 1012 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 KLHL3Q9UH77 587 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 POLIQ9UNA4 740 aa12.04□□□□□ -0.48
SYNGAP1-201ENST00000293748 ENPP3O14638 875 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 SMNDC1O75940 238 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 GNL1P36915 607 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 SMAD3P84022 425 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 IL5RAQ01344 420 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 WASHC5Q12768 1159 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TRIM71Q2Q1W2 868 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TCHHL1Q5QJ38 904 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 KYAT3Q6YP21 454 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 ZCCHC9Q8N567 271 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 USP13Q92995 863 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 C11orf84Q9BUA3 381 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 GPR63Q9BZJ6 419 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 RAD21L1Q9H4I0 556 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 WRAP73Q9P2S5 460 aaPredicted RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 USP18Q9UMW8 372 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TNFSF13BQ9Y275 285 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 C15orf38-AP3S2A0A0A6YYH1 394 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 NBNO60934 754 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 MYL4P12829 197 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 NCAM1P13591 858 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 ATP6V1C1P21283 382 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 IGFBP4P22692 258 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TALDO1P37837 337 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 HPCAP84074 193 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TRAF2Q12933 501 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 TRIM25Q14258 630 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 ZRANB3Q5FWF4 1079 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 NOMO2Q5JPE7 1267 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 MARK2Q7KZI7 788 aaKnown RBP12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 ARPINQ7Z6K5 226 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 MCOLN2Q8IZK6 566 aa12.03□□□□□ -0.48
SYNGAP1-201ENST00000293748 ATG16L2Q8NAA4 619 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms