RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 IL31Q6EBC2 164 aa20.34■□□□□ 0.85
TIMP4-201ENST00000287814 UMODL1-AS1Q8N2C9 162 aa20.34■□□□□ 0.85
TIMP4-201ENST00000287814 FRS2Q8WU20 508 aa20.34■□□□□ 0.85
TIMP4-201ENST00000287814 MRGPRX1Q96LB2 322 aa20.34■□□□□ 0.85
TIMP4-201ENST00000287814 CSPG4P5Q96PW8 444 aa20.34■□□□□ 0.85
TIMP4-201ENST00000287814 MAGEH1Q9H213 219 aa20.34■□□□□ 0.85
TIMP4-201ENST00000287814 ETNK2Q9NVF9 386 aa20.34■□□□□ 0.85
TIMP4-201ENST00000287814 PJA2O43164 708 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 DAPK3O43293 454 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 SMAD6O43541 496 aaKnown RBP20.33■□□□□ 0.85
TIMP4-201ENST00000287814 BUB1O43683 1085 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 CD160O95971 181 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 NBL1P41271 181 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 CDH6P55285 790 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 ARF5P84085 180 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 MMRN1Q13201 1228 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 C9orf64Q5T6V5 341 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 PGBD3Q8N328 593 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 SH2D3CQ8N5H7 860 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 PTPRN2Q92932 1015 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 CELF6Q96J87 481 aaKnown RBP20.33■□□□□ 0.85
TIMP4-201ENST00000287814 BCCIPQ9P287 314 aaKnown RBP eCLIP20.33■□□□□ 0.85
TIMP4-201ENST00000287814 TRIM10Q9UDY6 481 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 SUN2Q9UH99 717 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 HS3ST2Q9Y278 367 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 INVSQ9Y283 1065 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 ALG6Q9Y672 507 aa20.33■□□□□ 0.85
TIMP4-201ENST00000287814 H3BRJ5 948 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 ATP9BO43861 1147 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 SIN3BO75182 1162 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 SRCP12931 536 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 VASPP50552 380 aaPredicted RBP20.32■□□□□ 0.84
TIMP4-201ENST00000287814 ZNF135P52742 658 aaPredicted RBP20.32■□□□□ 0.84
TIMP4-201ENST00000287814 DLG2Q15700 870 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 TMPRSS6Q8IU80 811 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 TP53INP2Q8IXH6 220 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 NPWQ8N729 165 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 FRMD1Q8N878 549 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 TPCN2Q8NHX9 752 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 RLN3Q8WXF3 142 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 RAPGEF5Q92565 580 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 HMCESQ96FZ2 354 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 LRRC19Q9H756 370 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 CD93Q9NPY3 652 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 SLC25A13Q9UJS0 675 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 CKAP5Q14008 2032 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 BTNL10A8MVZ5 291 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 RASA4BC9J798 803 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 DCLK1O15075 740 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 RASA4O43374 803 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 ARL4AP40617 200 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 YBEYP58557 167 aaPredicted RBP20.32■□□□□ 0.84
TIMP4-201ENST00000287814 CCZ1BP86790 482 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 CCZ1P86791 482 aaPredicted RBP20.32■□□□□ 0.84
TIMP4-201ENST00000287814 DPYSL3Q14195 570 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 KRT81Q14533 505 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 LEKR1Q6ZMV7 388 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 KIAA1328Q86T90 577 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 ARHGAP12Q8IWW6 846 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 SLC39A8Q9C0K1 460 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 ADGRG1Q9Y653 693 aa20.32■□□□□ 0.84
TIMP4-201ENST00000287814 FANCMQ8IYD8 2048 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 CHD5Q8TDI0 1954 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 KRT7P08729 469 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 NNMTP40261 264 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 SLC1A1P43005 524 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 ACCSLQ4AC99 568 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 AFMIDQ63HM1 303 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 CACUL1Q86Y37 369 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 ATP11CQ8NB49 1132 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 KCTD6Q8NC69 237 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 OR2T3Q8NH03 318 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 FAM129BQ96TA1 746 aa20.31■□□□□ 0.84
TIMP4-201ENST00000287814 ARHGAP6O43182 974 aa20.3■□□□□ 0.84
TIMP4-201ENST00000287814 KDELR3O43731 214 aa20.3■□□□□ 0.84
TIMP4-201ENST00000287814 TNNT1P13805 278 aa20.3■□□□□ 0.84
TIMP4-201ENST00000287814 ETFBP38117 255 aa20.3■□□□□ 0.84
TIMP4-201ENST00000287814 SERINC3Q13530 473 aa20.3■□□□□ 0.84
TIMP4-201ENST00000287814 ZC3H14Q6PJT7 736 aaKnown RBP20.3■□□□□ 0.84
TIMP4-201ENST00000287814 FAM160A2Q8N612 972 aaPredicted RBP20.3■□□□□ 0.84
TIMP4-201ENST00000287814 CCDC112Q8NEF3 446 aa20.3■□□□□ 0.84
TIMP4-201ENST00000287814 CALN1Q9BXU9 219 aa20.3■□□□□ 0.84
TIMP4-201ENST00000287814 PRDM16Q9HAZ2 1276 aa20.3■□□□□ 0.84
TIMP4-201ENST00000287814 EML5Q05BV3 1969 aa20.3■□□□□ 0.84
TIMP4-201ENST00000287814 EDDM13A0A1B0GTR0 161 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 TARSL2A2RTX5 802 aaKnown RBP20.29■□□□□ 0.84
TIMP4-201ENST00000287814 SPOPO43791 374 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 ZNF821O75541 412 aaPredicted RBP20.29■□□□□ 0.84
TIMP4-201ENST00000287814 KDELR1P24390 212 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 NDST2P52849 883 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 MAP7D1Q3KQU3 841 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 PARP15Q460N3 678 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 LRRC38Q5VT99 294 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 RETSATQ6NUM9 610 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 KIAA1324Q6UXG2 1013 aaKnown RBP20.29■□□□□ 0.84
TIMP4-201ENST00000287814 Q6ZVU0 165 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 STK40Q8N2I9 435 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 PCDH19Q8TAB3 1148 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 GAB3Q8WWW8 586 aa20.29■□□□□ 0.84
TIMP4-201ENST00000287814 RCOR3Q9P2K3 495 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms