RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 IARS2Q9NSE4 1012 aaKnown RBP13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 C20orf96Q9NUD7 363 aaPredicted RBP13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 SLC39A10Q9ULF5 831 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 TSC2P49815 1807 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 CCDC78A2IDD5 438 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 FAM72CH0Y354 149 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 DCLK1O15075 740 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 SPTLC1O15269 473 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 HDAC3O15379 428 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 ZBTB24O43167 697 aaPredicted RBP13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 DENRO43583 198 aaKnown RBP13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 TIMM44O43615 452 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 DAB1O75553 588 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 PIGNO95427 931 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 GRIA4P48058 902 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 ATXN3P54252 364 aaPredicted RBP13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 CYLC2Q14093 348 aaPredicted RBP13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 ZNF423Q2M1K9 1284 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 RARS2Q5T160 578 aaKnown RBP13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 FAM72AQ5TYM5 149 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 SYPL2Q5VXT5 272 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 TMEM198Q66K66 360 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 FAM72DQ6L9T8 149 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 FAM72BQ86X60 149 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 CNDP1Q96KN2 507 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 MARK4Q96L34 752 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 CATSPER2Q96P56 530 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 UBE2OQ9C0C9 1292 aaKnown RBP13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 OCEL1Q9H607 264 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 PRDM16Q9HAZ2 1276 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 CASS4Q9NQ75 786 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 CHRAC1Q9NRG0 131 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 PIGVQ9NUD9 493 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 RAP2CQ9Y3L5 183 aa13.49□□□□□ -0.25
SLC28A1-201ENST00000286749 GRID2O43424 1007 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 CRTAMO95727 393 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 ENO3P13929 434 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 TPH1P17752 444 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 HOXA11P31270 313 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 GLRBP48167 497 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 NDUFV1P49821 464 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 RPL14P50914 215 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 ADGRE1Q14246 886 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 PIGGQ5H8A4 983 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 ARL13AQ5H913 290 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 FBXO47Q5MNV8 452 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 ARHGAP22Q7Z5H3 698 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 NPY6RQ99463 290 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 DRC3Q9H069 523 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 NXF3Q9H4D5 531 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 COPS7BQ9H9Q2 264 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 SETD4Q9NVD3 440 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 A0A0G2JLL6 359 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 JUNP05412 331 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 ERCC2P18074 760 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 AKAP5P24588 427 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 PPARGP37231 505 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 MS4A2Q01362 244 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 LAMC2Q13753 1193 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 CEACAM7Q14002 265 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 PPP2R5DQ14738 602 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 GRM3Q14832 879 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 SLC5A9Q2M3M2 681 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 NXNQ6DKJ4 435 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 ARMCX2Q7L311 632 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 PRRT2Q7Z6L0 340 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 BHLHE22Q8NFJ8 381 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 RP9Q8TA86 221 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 PRICKLE1Q96MT3 831 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 MLPHQ9BV36 600 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 GPRC5DQ9NZD1 345 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 RIMS3Q9UJD0 308 aa13.48□□□□□ -0.25
SLC28A1-201ENST00000286749 STX16-NPEPL1H3BU86 382 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 CLDN5O00501 218 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 XPO1O14980 1071 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 PHGDHO43175 533 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 SBK3P0C264 359 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 CD68P34810 354 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 NOS2P35228 1153 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 AVPR1AP37288 418 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 NAGLUP54802 743 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 CSE1LP55060 971 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 GK3PQ14409 553 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 PDCD2Q16342 344 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 LIPMQ5VYY2 423 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 ARMC3Q5W041 872 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 SLC27A1Q6PCB7 646 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 ZYG11AQ6WRX3 759 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 HFE2Q6ZVN8 426 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 RNF169Q8NCN4 708 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 SLC7A14Q8TBB6 771 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 OPTNQ96CV9 577 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 SCYL1Q96KG9 808 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 CNBD2Q96M20 576 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 EPB41L1Q9H4G0 881 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 Q9H521 79 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 ZDHHC2Q9UIJ5 367 aa13.47□□□□□ -0.25
SLC28A1-201ENST00000286749 AP4B1Q9Y6B7 739 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms