RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 SH3PXD2AQ5TCZ1 1133 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 IL23RQ5VWK5 629 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PPP4R4Q6NUP7 873 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 DEFB128Q7Z7B8 93 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PRUNE1Q86TP1 453 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 UNC45BQ8IWX7 931 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PALM2Q8IXS6 379 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PGBD4Q96DM1 585 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PIWIL1Q96J94 861 aaKnown RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 TSGA13Q96PP4 275 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 SSU72Q9NP77 194 aaKnown RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PSMC3IPQ9P2W1 217 aaPredicted RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 SAE1Q9UBE0 346 aaPredicted RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PFDN2Q9UHV9 154 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 CDH9Q9ULB4 789 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 AP4E1Q9UPM8 1137 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 L3MBTL1Q9Y468 752 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 SF3B1O75533 1304 aaKnown RBP eCLIP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 SCN1AP35498 2009 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 TNRC18O15417 2968 aaPredicted RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 TMEM120BA0PK00 339 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 CDK2AP1O14519 115 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 LILRB3O75022 631 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 ZNF623O75123 536 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 GSTA2P09210 222 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 ACRP10323 421 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 CDK4P11802 303 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 BRAFP15056 766 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 RAG1P15918 1043 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 IL32P24001 234 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 CYP2F1P24903 491 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 TKTP29401 623 aaKnown RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PRKAR1BP31321 381 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 L1CAMP32004 1257 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 MAGEA6P43360 314 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 YWHAZP63104 245 aaKnown RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 MRPS5P82675 430 aaKnown RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 MMRN1Q13201 1228 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 ITIH4Q14624 930 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 EFHC2Q5JST6 749 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 UBAP2Q5T6F2 1119 aaKnown RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PIGZQ86VD9 579 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 SIX6OS1Q8N1H7 587 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 C7orf57Q8NEG2 295 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 LRRC39Q96DD0 335 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 SENP8Q96LD8 212 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 CATSPER2Q96P56 530 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 ZNF317Q96PQ6 595 aaPredicted RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 SLC9A7Q96T83 725 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 MED10Q9BTT4 135 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 HTATIP2Q9BUP3 242 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 TRIM62Q9BVG3 475 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 FAM192AQ9GZU8 254 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PIF1Q9H611 641 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PIDD1Q9HB75 910 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PLSCR2Q9NRY7 297 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 HNRNPCL2B2RXH8 293 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 PRPF4O43172 522 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 HNRNPCL1O60812 293 aaKnown RBP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 RNGTTO60942 597 aaKnown RBP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 ANP32DO95626 131 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 ODC1P11926 461 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 HOXB1P14653 301 aaPredicted RBP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 DRD4P21917 467 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 CDC25CP30307 473 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 SULT1E1P49888 294 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 CCNG1P51959 295 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 POLE2P56282 527 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 IL9RQ01113 521 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 SEMA3AQ14563 771 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 KCNJ11Q14654 390 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 C1orf228Q6PIY5 440 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 RTL10Q7L3V2 364 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 ZC3H18Q86VM9 953 aaKnown RBP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 METTL23Q86XA0 190 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 PQLC3Q8N755 202 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 LSMEM1Q8N8F7 131 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 CCDC197Q8NCU1 140 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 PCDH19Q8TAB3 1148 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 NT5C3BQ969T7 300 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 ALKBH8Q96BT7 664 aaKnown RBP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 SEC16BQ96JE7 1060 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 PWWP2AQ96N64 755 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 PRMT1Q99873 361 aaKnown RBP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 B3GNT5Q9BYG0 378 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 DHX35Q9H5Z1 703 aaKnown RBP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 ACSS3Q9H6R3 686 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 GOLGA2P5Q9HBQ8 144 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 POPDC2Q9HBU9 364 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 KCNK9Q9NPC2 374 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 CNGB3Q9NQW8 809 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 DDX43Q9NXZ2 648 aaKnown RBP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 TSC22D4Q9Y3Q8 395 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 RAD54BQ9Y620 910 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.73□□□□□ -1.17
TRIM42-201ENST00000286349 KRBA1A5PL33 1030 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 FAM47DPA6NHR8 397 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 H3BRJ5 948 aa7.73□□□□□ -1.17
TRIM42-201ENST00000286349 ARHGAP33O14559 1287 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms