RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 COILP38432 576 aaPredicted RBP22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 ATP5OP48047 213 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 GDF10P55107 478 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 ARF5P84085 180 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 PITRM1Q5JRX3 1037 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 CCDC137Q6PK04 289 aaKnown RBP22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 TXNDC11Q6PKC3 985 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 LEKR1Q6ZMV7 388 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 KLHL7Q8IXQ5 586 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 TFB1MQ8WVM0 346 aaKnown RBP22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 ZNF419Q96HQ0 510 aaPredicted RBP22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 QKIQ96PU8 341 aaKnown RBP eCLIP22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 FRMD8P1Q9BZ68 369 aaPredicted RBP22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 PDFQ9HBH1 243 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 HOMER3Q9NSC5 361 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 DEC1Q9P2X7 70 aa22.29■■□□□ 1.16
PDLIM3-203ENST00000284771 GOLGA6L10A0A0M3HER8 536 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 ANTXRLA6NF34 631 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 CCDC188H7C350 402 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 KDELR3O43731 214 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 SRFP11831 508 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 AP1B1Q10567 949 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 SLC12A1Q13621 1099 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 SLC45A4Q5BKX6 768 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 DARS2Q6PI48 645 aaKnown RBP22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 ZNF354CQ86Y25 554 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 LRRC49Q8IUZ0 686 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 ATPAF2Q8N5M1 289 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 DNASE1L2Q92874 299 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 CD320Q9NPF0 282 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 SLC2A4RGQ9NR83 387 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 VPS51Q9UID3 782 aa22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 DRG1Q9Y295 367 aaKnown RBP22.28■■□□□ 1.16
PDLIM3-203ENST00000284771 BCLAF3A2AJT9 711 aaKnown RBP22.27■■□□□ 1.16
PDLIM3-203ENST00000284771 PRRT4C9JH25 899 aa22.27■■□□□ 1.16
PDLIM3-203ENST00000284771 KCNK1O00180 336 aa22.27■■□□□ 1.16
PDLIM3-203ENST00000284771 CBX4O00257 560 aa22.27■■□□□ 1.16
PDLIM3-203ENST00000284771 PPP1R12AO14974 1030 aaPredicted RBP22.27■■□□□ 1.16
PDLIM3-203ENST00000284771 CCNCP24863 283 aa22.27■■□□□ 1.16
PDLIM3-203ENST00000284771 ZNF557Q8N988 423 aaPredicted RBP22.27■■□□□ 1.16
PDLIM3-203ENST00000284771 NOA1Q8NC60 698 aaKnown RBP22.27■■□□□ 1.16
PDLIM3-203ENST00000284771 KRT12Q99456 494 aa22.27■■□□□ 1.16
PDLIM3-203ENST00000284771 ZNF148Q9UQR1 794 aa22.27■■□□□ 1.16
PDLIM3-203ENST00000284771 HACD1B0YJ81 288 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 SPECC1L-ADORA2AF8WAN1 911 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 PRAMEF11O60813 436 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 MT-CO1P00395 513 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 ITGAVP06756 1048 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 CHRNA3P32297 505 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 CTHP32929 405 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 EIF2DP41214 584 aaKnown RBP22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 CTSOP43234 321 aaPredicted RBP22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 GALK1P51570 392 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 OXCT1P55809 520 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 MRPS25P82663 173 aaKnown RBP22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 KDSRQ06136 332 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 LINGO4Q6UY18 593 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 PRUNE1Q86TP1 453 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 CCDC13Q8IYE1 715 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 CEP112Q8N8E3 955 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 DCAF4L2Q8NA75 395 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 GLIS1Q8NBF1 620 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 BRD8Q9H0E9 1235 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 AMACRQ9UHK6 382 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 DUSP12Q9UNI6 340 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 PIAS3Q9Y6X2 628 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 CTAGE15A4D2H0 777 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 CTAGE8P0CG41 777 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 ETFBP38117 255 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 ZNF33AQ06730 810 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 IL10RBQ08334 325 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 WASHC5Q12768 1159 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 CTAGE6Q86UF2 777 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 RNF135Q8IUD6 432 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 CTAGE4Q8IX94 777 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 AHI1Q8N157 1196 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 FAM71DQ8N9W8 422 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 ATL2Q8NHH9 583 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 HTR3CQ8WXA8 447 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 PCYOX1Q9UHG3 505 aa22.26■■□□□ 1.15
PDLIM3-203ENST00000284771 MATN3O15232 486 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 FNTAP49354 379 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 CLCN6P51797 869 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 SLC10A7Q0GE19 358 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 ZBTB17Q13105 803 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 MBLAC2Q68D91 279 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 GRAMD4Q6IC98 578 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 CCDC105Q8IYK2 499 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 TERB1Q8NA31 727 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 MNS1Q8NEH6 495 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 SORCS1Q8WY21 1168 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 EZH1Q92800 747 aaPredicted RBP22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 TTC17Q96AE7 1141 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 ACDQ96AP0 544 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 PNKPQ96T60 521 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 CEP41Q9BYV8 373 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 SORCS3Q9UPU3 1222 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 NEU2Q9Y3R4 380 aa22.25■■□□□ 1.15
PDLIM3-203ENST00000284771 MYO18AQ92614 2054 aaKnown RBP22.24■■□□□ 1.15
PDLIM3-203ENST00000284771 A0A0A0MRY4 1105 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms