RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 MFSD11O43934 449 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 LTFP02788 710 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 CYP11A1P05108 521 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 PGFP49763 221 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 GATMP50440 423 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 XIAPP98170 497 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 BMPR2Q13873 1038 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 CNPY1Q3B7I2 92 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 LIN52Q52LA3 116 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 STXBP5Q5T5C0 1151 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 RASIP1Q5U651 963 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 DHDDSQ86SQ9 333 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 PDSS2Q86YH6 399 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 WDR75Q8IWA0 830 aaKnown RBP18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 ST13P4Q8IZP2 240 aaPredicted RBP18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 NDUFAF2Q8N183 169 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 MCUQ8NE86 351 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 RNF139Q8WU17 664 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 CFHR5Q9BXR6 569 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 CEP41Q9BYV8 373 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 C20orf27Q9GZN8 174 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 XAB2Q9HCS7 855 aaKnown RBP18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 WDR6Q9NNW5 1121 aaKnown RBP18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 VCX3AQ9NNX9 186 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 CNGB3Q9NQW8 809 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 PCMTD2Q9NV79 361 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 TBC1D30Q9Y2I9 924 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 KLHL2O95198 593 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 METTL18O95568 372 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 PIM1P11309 404 aaPredicted RBP18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 ARL4AP40617 200 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 OR1G1P47890 313 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 UBAP2LQ14157 1087 aaKnown RBP18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 SLC5A9Q2M3M2 681 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 TET1Q8NFU7 2136 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 OR6Y1Q8NGX8 325 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 CSNK1G1Q9HCP0 422 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 DDIT4Q9NX09 232 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 FRMPD3Q5JV73 1810 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 BCLAF3A2AJT9 711 aaKnown RBP18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 FAM159BA6NKW6 160 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 CCNT2O60583 730 aaKnown RBP18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 USP1O94782 785 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 CSH1P0DML2 217 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 CSH2P0DML3 217 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 GPNMBQ14956 572 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 DCLRE1AQ6PJP8 1040 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 C4orf22Q6V702 233 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 UNC5AQ6ZN44 842 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 TIFABQ6ZNK6 161 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 RAPH1Q70E73 1250 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 SLC43A3Q8NBI5 491 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 GSDMBQ8TAX9 411 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 DTNBP1Q96EV8 351 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 SUSD3Q96L08 255 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 B3GALT6Q96L58 329 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 EBF4Q9BQW3 602 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 TBC1D13Q9NVG8 400 aa18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 MRPL42Q9Y6G3 142 aaKnown RBP18.7■□□□□ 0.58
PDLIM3-201ENST00000284767 ARVCFO00192 962 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 NBNO60934 754 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 VAV1P15498 845 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 CNTFP26441 200 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 APLP1P51693 650 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 SH3BGRP55822 239 aaPredicted RBP18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 SDHAF4Q5VUM1 108 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 JADE3Q92613 823 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 MYO18AQ92614 2054 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 UGT1A9O60656 530 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 RNASEH1O60930 286 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 FBXO21O94952 628 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 APRTP07741 180 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 TUBB3Q13509 450 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 NOMO2Q5JPE7 1267 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 MARK2Q7KZI7 788 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 RASSF3Q86WH2 238 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 DBF4BQ8NFT6 615 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 PIWIL2Q8TC59 973 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 EBF3Q9H4W6 596 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 UGT1A7Q9HAW7 530 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 UGT1A10Q9HAW8 530 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 UGT1A8Q9HAW9 530 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 SQORQ9Y6N5 450 aa18.69■□□□□ 0.58
PDLIM3-201ENST00000284767 MAGEA3P43357 314 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 RPL26P61254 145 aaKnown RBP18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 YWHAHQ04917 246 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 ASPHQ12797 758 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 TCTN1Q2MV58 587 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 BSPRYQ5W0U4 402 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 LRRC8DQ7L1W4 858 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 REM2Q8IYK8 340 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 SLC25A41Q8N5S1 370 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 PPP1R14CQ8TAE6 165 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 TSEN34Q9BSV6 310 aaKnown RBP18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 FAM96AQ9H5X1 160 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 NUDT5Q9UKK9 219 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 HMX2A2RU54 273 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 ARHGAP42A6NI28 874 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 ADRA1BP35368 520 aa18.68■□□□□ 0.58
PDLIM3-201ENST00000284767 PDE1BQ01064 536 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms