RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 GTF2IRD1Q9UHL9 959 aa28.02■■■□□ 2.08
CBX4-201ENST00000269397 TFEBP19484 476 aa28.01■■■□□ 2.07
CBX4-201ENST00000269397 RPL14P50914 215 aaKnown RBP28.01■■■□□ 2.07
CBX4-201ENST00000269397 NME3Q13232 169 aa28.01■■■□□ 2.07
CBX4-201ENST00000269397 ZDHHC17Q8IUH5 632 aa28.01■■■□□ 2.07
CBX4-201ENST00000269397 C20orf96Q9NUD7 363 aaPredicted RBP28.01■■■□□ 2.07
CBX4-201ENST00000269397 RAB26Q9ULW5 256 aa28.01■■■□□ 2.07
CBX4-201ENST00000269397 GRID2O43424 1007 aa28.01■■■□□ 2.07
CBX4-201ENST00000269397 GLUD2P49448 558 aa28.01■■■□□ 2.07
CBX4-201ENST00000269397 ZNF618Q5T7W0 954 aa28.01■■■□□ 2.07
CBX4-201ENST00000269397 UBP1Q9NZI7 540 aa28.01■■■□□ 2.07
CBX4-201ENST00000269397 PCSK6P29122 969 aa28■■■□□ 2.07
CBX4-201ENST00000269397 TTC39CQ8N584 583 aa28■■■□□ 2.07
CBX4-201ENST00000269397 RP9Q8TA86 221 aaKnown RBP28■■■□□ 2.07
CBX4-201ENST00000269397 SREK1Q8WXA9 508 aaKnown RBP28■■■□□ 2.07
CBX4-201ENST00000269397 SCYL1Q96KG9 808 aa28■■■□□ 2.07
CBX4-201ENST00000269397 ADAM28Q9UKQ2 775 aa28■■■□□ 2.07
CBX4-201ENST00000269397 BST2Q10589 180 aaKnown RBP28■■■□□ 2.07
CBX4-201ENST00000269397 MPP3Q13368 585 aa28■■■□□ 2.07
CBX4-201ENST00000269397 ART3Q13508 389 aa28■■■□□ 2.07
CBX4-201ENST00000269397 NRF1Q16656 503 aa28■■■□□ 2.07
CBX4-201ENST00000269397 FAM187BQ17R55 369 aa28■■■□□ 2.07
CBX4-201ENST00000269397 AMIGO2Q86SJ2 522 aa28■■■□□ 2.07
CBX4-201ENST00000269397 SPATA6LQ8N4H0 392 aa28■■■□□ 2.07
CBX4-201ENST00000269397 ISL2Q96A47 359 aa28■■■□□ 2.07
CBX4-201ENST00000269397 VPS39Q96JC1 886 aa28■■■□□ 2.07
CBX4-201ENST00000269397 MRPL1Q9BYD6 325 aaKnown RBP28■■■□□ 2.07
CBX4-201ENST00000269397 GALNT8Q9NY28 637 aa28■■■□□ 2.07
CBX4-201ENST00000269397 TMEM233B4DJY2 109 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 TSPAN1O60635 241 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 TNFAIP8O95379 198 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 NELFEP18615 380 aaKnown RBP27.99■■■□□ 2.07
CBX4-201ENST00000269397 PPARGP37231 505 aaPredicted RBP27.99■■■□□ 2.07
CBX4-201ENST00000269397 SNX16P57768 344 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 SPNS2Q8IVW8 549 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 SLC2A14Q8TDB8 520 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 AFG1LQ8WV93 481 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 RBM38Q9H0Z9 239 aaKnown RBP27.99■■■□□ 2.07
CBX4-201ENST00000269397 SEMA6AQ9H2E6 1030 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 SNTG2Q9NY99 539 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 BFARQ9NZS9 450 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 RAP2CQ9Y3L5 183 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 MPOP05164 745 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 GRM3Q14832 879 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 KCNMB4Q86W47 210 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 TICAM1Q8IUC6 712 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 PHF12Q96QT6 1004 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 NFKBIZQ9BYH8 718 aa27.99■■■□□ 2.07
CBX4-201ENST00000269397 SENP6Q9GZR1 1112 aaPredicted RBP27.99■■■□□ 2.07
CBX4-201ENST00000269397 FAM72CH0Y354 149 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 SBK3P0C264 359 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 CYTH1Q15438 398 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 FAM72AQ5TYM5 149 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 FAM72DQ6L9T8 149 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 TMEM135Q86UB9 458 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 FAM72BQ86X60 149 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 CNDP1Q96KN2 507 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 MRPS26Q9BYN8 205 aaKnown RBP27.98■■■□□ 2.07
CBX4-201ENST00000269397 RNASEH2AO75792 299 aaKnown RBP27.98■■■□□ 2.07
CBX4-201ENST00000269397 STAU1O95793 577 aaKnown RBP27.98■■■□□ 2.07
CBX4-201ENST00000269397 ME2P23368 584 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 GADL1Q6ZQY3 521 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 ANKRD52Q8NB46 1076 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 TMCO1Q9UM00 188 aa27.98■■■□□ 2.07
CBX4-201ENST00000269397 FAM58BPP0C7Q3 252 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 ARSAP15289 507 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 PTPN1P18031 435 aaKnown RBP27.97■■■□□ 2.07
CBX4-201ENST00000269397 PTPN3P26045 913 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 MATKP42679 507 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 ADIGQ0VDE8 80 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 ZNF460Q14592 562 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 PDCD6IPQ8WUM4 868 aaKnown RBP27.97■■■□□ 2.07
CBX4-201ENST00000269397 KCTD4Q8WVF5 259 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 DRC3Q9H069 523 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 ERAP1Q9NZ08 941 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 IGSF9Q9P2J2 1179 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 H3BSA7 217 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 ZBTB24O43167 697 aaPredicted RBP27.97■■■□□ 2.07
CBX4-201ENST00000269397 BCAT1P54687 386 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 STRADAQ7RTN6 431 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 PSTKQ8IV42 348 aaKnown RBP27.97■■■□□ 2.07
CBX4-201ENST00000269397 AHI1Q8N157 1196 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 SUDS3Q9H7L9 328 aaPredicted RBP27.97■■■□□ 2.07
CBX4-201ENST00000269397 GJD2Q9UKL4 321 aa27.97■■■□□ 2.07
CBX4-201ENST00000269397 SH3BGRP55822 239 aaPredicted RBP27.96■■■□□ 2.07
CBX4-201ENST00000269397 EN1Q05925 392 aaPredicted RBP27.96■■■□□ 2.07
CBX4-201ENST00000269397 OTUD1Q5VV17 481 aaPredicted RBP27.96■■■□□ 2.07
CBX4-201ENST00000269397 ZFP1Q6P2D0 407 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 LCA5Q86VQ0 697 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 PGAM4Q8N0Y7 254 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 TMEM151AQ8N4L1 468 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 ADCY4Q8NFM4 1077 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 ATP6V1E2Q96A05 226 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 FIS1Q9Y3D6 152 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 LOC285556D6RIA3 1793 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 NUP205Q92621 2012 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 TMCC1O94876 653 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 CSPG5O95196 566 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 FGFR3P22607 806 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 SLC25A52Q3SY17 297 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms