RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 RTL10Q7L3V2 364 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 TAOK1Q7L7X3 1001 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 PALM2Q8IXS6 379 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 TAB3Q8N5C8 712 aaPredicted RBP15.71■□□□□ 0.11
COPS3-201ENST00000268717 ACSS3Q9H6R3 686 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 SEPT10Q9P0V9 454 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 BCCIPQ9P287 314 aaKnown RBP eCLIP15.71■□□□□ 0.11
COPS3-201ENST00000268717 ACTL7BQ9Y614 415 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 KCNK1O00180 336 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 MATN3O15232 486 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 MAFKO60675 156 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 LATS1O95835 1130 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 OAS1P00973 400 aaKnown RBP15.7■□□□□ 0.1
COPS3-201ENST00000268717 PSMB4P28070 264 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 ELK3P41970 407 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 MAGOHP61326 146 aaKnown RBP15.7■□□□□ 0.1
COPS3-201ENST00000268717 PPP2R2AP63151 447 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 SMAD4Q13485 552 aaKnown RBP15.7■□□□□ 0.1
COPS3-201ENST00000268717 LONRF1Q17RB8 773 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 PABPC1LQ4VXU2 614 aaKnown RBP15.7■□□□□ 0.1
COPS3-201ENST00000268717 FBXL22Q6P050 247 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 CCDC149Q6ZUS6 474 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 PID1Q7Z2X4 250 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 CCNJLQ8IV13 435 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 ANKMY2Q8IV38 441 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 CNPY4Q8N129 248 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 SMRP1Q8NCR6 262 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 CELF6Q96J87 481 aaKnown RBP15.7■□□□□ 0.1
COPS3-201ENST00000268717 IL12RB2Q99665 862 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 VANGL2Q9ULK5 521 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 FAM50BQ9Y247 325 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 HCFC2Q9Y5Z7 792 aa15.7■□□□□ 0.1
COPS3-201ENST00000268717 MTCL1Q9Y4B5 1905 aaKnown RBP15.69■□□□□ 0.1
COPS3-201ENST00000268717 AP3B1O00203 1094 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 PSMD3O43242 534 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 COCHO43405 550 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 MBTPS2O43462 519 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 AP2A1O95782 977 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 ADH1AP07327 375 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 CNPP09543 421 aaKnown RBP15.69■□□□□ 0.1
COPS3-201ENST00000268717 TACR2P21452 398 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 IFNAR2P48551 515 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 LMAN1P49257 510 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 SLC11A2P49281 568 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 HARS2P49590 506 aaKnown RBP15.69■□□□□ 0.1
COPS3-201ENST00000268717 ZBTB17Q13105 803 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 ANO4Q32M45 955 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 LILRA6Q6PI73 481 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 C3orf62Q6ZUJ4 267 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 CYS1Q717R9 158 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 DNAJB7Q7Z6W7 309 aaPredicted RBP15.69■□□□□ 0.1
COPS3-201ENST00000268717 NETO2Q8NC67 525 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 MAML1Q92585 1016 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 NAT9Q9BTE0 207 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 SLC39A8Q9C0K1 460 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 NACA2Q9H009 215 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 ZNF212Q9UDV6 495 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 CHMP2BQ9UQN3 213 aa15.69■□□□□ 0.1
COPS3-201ENST00000268717 SRRM3A6NNA2 597 aaPredicted RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 DFFAO00273 331 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 TRDMT1O14717 391 aaKnown RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 ACSL4O60488 711 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 BANF1O75531 89 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 STX2P32856 288 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 SLCO1A2P46721 670 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 GEMIN4P57678 1058 aaKnown RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 YBEYP58557 167 aaPredicted RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 TNK2Q07912 1038 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 SMAD2Q15796 467 aaKnown RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 PARP15Q460N3 678 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 RAP1GAP2Q684P5 730 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 ANKRD54Q6NXT1 300 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 CHSY1Q86X52 802 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 SIGLEC10Q96LC7 697 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 KLHL5Q96PQ7 755 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 CYTH2Q99418 400 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 EBNA1BP2Q99848 306 aaKnown RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 DHRS4Q9BTZ2 278 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 EMILIN2Q9BXX0 1053 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 CAPS2Q9BXY5 557 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 MPP6Q9NZW5 540 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 RSPH14Q9UHP6 348 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 RABGEF1Q9UJ41 708 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 ARHGAP42A6NI28 874 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 SMIM23A6NLE4 172 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 F5H5T6 163 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 ZBTB24O43167 697 aaPredicted RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 TGM5O43548 720 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 OLFM2O95897 454 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 F11P03951 625 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 CCNB1P14635 433 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 PFKLP17858 780 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 CD68P34810 354 aaPredicted RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 PRPSAP1Q14558 356 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 KCTD11Q693B1 232 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 NADSYN1Q6IA69 706 aa15.68■□□□□ 0.1
COPS3-201ENST00000268717 AGGF1Q8N302 714 aaeCLIP15.68■□□□□ 0.1
COPS3-201ENST00000268717 PDCD7Q8N8D1 485 aaKnown RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 RPRD1AQ96P16 312 aaPredicted RBP15.68■□□□□ 0.1
COPS3-201ENST00000268717 DDX50Q9BQ39 737 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms