RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 GLOD4Q9HC38 313 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 RBM22Q9NW64 420 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCAF11-201ENST00000266589 SYBUQ9NX95 663 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 PCDHA11Q9Y5I1 949 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 J3KR12 359 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 CACNG3O60359 315 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 LRG1P02750 347 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 KLKB1P03952 638 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 MBL2P11226 248 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-201ENST00000266589 BRAFP15056 766 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 PRKCHP24723 683 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 BMPR1AP36894 532 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 ERVFC1P60507 584 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 POLD3Q15054 466 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-201ENST00000266589 PLPP4Q5VZY2 271 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 LILRA6Q6PI73 481 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 LEKR1Q6ZMV7 388 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 TRABD2AQ86V40 505 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 DNAAF3Q8N9W5 541 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 SPATA22Q8NHS9 363 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 DCAKDQ8WVC6 231 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 ARNTL2Q8WYA1 636 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 FCRL5Q96RD9 977 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 EMILIN2Q9BXX0 1053 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 LRRC40Q9H9A6 602 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 CASS4Q9NQ75 786 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 SMPD4Q9NXE4 827 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 AAR2Q9Y312 384 aaKnown RBP11.8□□□□□ -0.52
SCAF11-201ENST00000266589 ASB3Q9Y575 518 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 ACTL7BQ9Y614 415 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 IKBKGQ9Y6K9 419 aa11.8□□□□□ -0.52
SCAF11-201ENST00000266589 TMEM120BA0PK00 339 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 TRDMT1O14717 391 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 PEX11BO96011 259 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 C1QAP02745 245 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 C8AP07357 584 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 PARP15Q460N3 678 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 PABPC1LQ4VXU2 614 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 RABGAP1LQ5R372 815 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 TXNDC8Q6A555 127 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 CCDC149Q6ZUS6 474 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 CTAGE3PQ8IX95 158 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 SLC44A1Q8WWI5 657 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 WBP2Q969T9 261 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 AZIN2Q96A70 460 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 PABPC5Q96DU9 382 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 PRICKLE1Q96MT3 831 aaPredicted RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 SLC22A12Q96S37 553 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 CYP2S1Q96SQ9 504 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 APOL2Q9BQE5 337 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 KCNK9Q9NPC2 374 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 AGO1Q9UL18 857 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 LZTS1Q9Y250 596 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 ZFP37Q9Y6Q3 630 aaPredicted RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 DENND4CQ5VZ89 1909 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 HIDE1A8MVS5 230 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 PSMD3O43242 534 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 MT-CYBP00156 380 aaPredicted RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 INHBAP08476 426 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 PGAM1P18669 254 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 GABRR2P28476 465 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 ACVRL1P37023 503 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 RENBPP51606 427 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 YBEYP58557 167 aaPredicted RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 RPS24P62847 133 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 HNRNPDQ14103 355 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 STEAP4Q687X5 459 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 NAPEPLDQ6IQ20 393 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 TRMT10BQ6PF06 316 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 CCNJLQ8IV13 435 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 KLHDC8BQ8IXV7 354 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 PPM1NQ8N819 430 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 ARL14EPQ8N8R7 260 aaPredicted RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 KREMEN2Q8NCW0 462 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 FATE1Q969F0 183 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 ZFRQ96KR1 1074 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 NAT9Q9BTE0 207 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 MTIF3Q9H2K0 278 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 TRABDQ9H4I3 376 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 KIF9Q9HAQ2 790 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 PPANQ9NQ55 473 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 INTS9Q9NV88 658 aaKnown RBP11.79□□□□□ -0.52
SCAF11-201ENST00000266589 SAMD15Q9P1V8 674 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 IRAK3Q9Y616 596 aa11.79□□□□□ -0.52
SCAF11-201ENST00000266589 C2orf71A6NGG8 1288 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 CXorf49A8MYA2 514 aaPredicted RBP11.78□□□□□ -0.52
SCAF11-201ENST00000266589 ANXA9O76027 345 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 GLUD1P00367 558 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 DNAJB1P25685 340 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 IFNAR2P48551 515 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 SGSHP51688 502 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 CDH4P55283 916 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 SMAD3P84022 425 aaKnown RBP11.78□□□□□ -0.52
SCAF11-201ENST00000266589 CYP4F8P98187 520 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 IL10RBQ08334 325 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 SLC10A7Q0GE19 358 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 SERINC3Q13530 473 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 ADGRF1Q5T601 910 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 MARC1Q5VT66 337 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms