RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ATP11CQ8NB49 1132 aa7.42□□□□□ -1.22
DEPDC1B-201ENST00000265036 GRIN3AQ8TCU5 1115 aa7.42□□□□□ -1.22
DEPDC1B-201ENST00000265036 CSPG4P5Q96PW8 444 aa7.42□□□□□ -1.22
DEPDC1B-201ENST00000265036 GABRG3Q99928 467 aa7.42□□□□□ -1.22
DEPDC1B-201ENST00000265036 PCDH18Q9HCL0 1135 aa7.42□□□□□ -1.22
DEPDC1B-201ENST00000265036 POLMQ9NP87 494 aaPredicted RBP7.42□□□□□ -1.22
DEPDC1B-201ENST00000265036 TMEM248Q9NWD8 314 aa7.42□□□□□ -1.22
DEPDC1B-201ENST00000265036 PPARGC1AQ9UBK2 798 aaKnown RBP7.42□□□□□ -1.22
DEPDC1B-201ENST00000265036 PACSIN2Q9UNF0 486 aaPredicted RBP7.42□□□□□ -1.22
DEPDC1B-201ENST00000265036 CYP8B1Q9UNU6 501 aa7.42□□□□□ -1.22
DEPDC1B-201ENST00000265036 ANKRD36A6QL64 1941 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 KRT1P04264 644 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 PTMAP06454 111 aaKnown RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 BCKDHBP21953 392 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 ARL4AP40617 200 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 DYNLT1P63172 113 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 CCZ1BP86790 482 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 CCZ1P86791 482 aaPredicted RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 MTA1Q13330 715 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 POLD3Q15054 466 aaPredicted RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 DLG2Q15700 870 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 DPYSL2Q16555 572 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 HADHQ16836 314 aaKnown RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 SETD3Q86TU7 594 aaPredicted RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 TMPRSS6Q8IU80 811 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 LRRC8AQ8IWT6 810 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 ZNF557Q8N988 423 aaPredicted RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 DCAF4L2Q8NA75 395 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 CCDC26Q8TAB7 109 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 RAPGEF5Q92565 580 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 TTC17Q96AE7 1141 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 RNF25Q96BH1 459 aaPredicted RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 MRGPRX1Q96LB2 322 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 C2orf49Q9BVC5 232 aaPredicted RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 TMEM245Q9H330 911 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 CD248Q9HCU0 757 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 LUC7LQ9NQ29 371 aaKnown RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 PRSS16Q9NQE7 514 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 SLC25A13Q9UJS0 675 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 FBXO4Q9UKT5 387 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 CAPN6Q9Y6Q1 641 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 CACNA1EQ15878 2313 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 CABIN1Q9Y6J0 2220 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 ILVBLA1L0T0 632 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 RASA4BC9J798 803 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 RASA4O43374 803 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 HRO43593 1189 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 MFSD11O43934 449 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 SRCP12931 536 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 GKP32189 559 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 ETFBP38117 255 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 PSMD8P48556 350 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 MRE11P49959 708 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 COPAP53621 1224 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 AIF1P55008 147 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 OXCT1P55809 520 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 NRG1Q02297 640 aaPredicted RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 DPYSQ14117 519 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 DPYSL3Q14195 570 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 CCDC6Q16204 474 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 B4GALNT4Q76KP1 1039 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 POLNQ7Z5Q5 900 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 MMAAQ8IVH4 418 aaKnown RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 STK40Q8N2I9 435 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 KCTD6Q8NC69 237 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 KRT35Q92764 455 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 ARHGEF2Q92974 986 aaKnown RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 IER2Q9BTL4 223 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 CATSPERBQ9H7T0 1116 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 LZTFL1Q9NQ48 299 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 ZSCAN32Q9NX65 697 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 SERGEFQ9UGK8 458 aa7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 ATXN2Q99700 1313 aaKnown RBP7.41□□□□□ -1.22
DEPDC1B-201ENST00000265036 PRR23AA6NEV1 266 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 H3BRJ5 948 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 J3KR12 359 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 RNF103O00237 685 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 FGF10O15520 208 aaPredicted RBP7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 RPP40O75818 363 aaKnown RBP7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 MTA2O94776 668 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 FTCDO95954 541 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 MAPKAPK2P49137 400 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 GSE1Q14687 1217 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 ACAP1Q15027 740 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 HNRNPA1L2Q32P51 320 aaKnown RBP7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 BOLA3Q53S33 107 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 ATXN7L2Q5T6C5 722 aaPredicted RBP7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 C22orf39Q6P5X5 142 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 CEP68Q76N32 757 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 SH2D3CQ8N5H7 860 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 ZBTB44Q8NCP5 570 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 TPCN2Q8NHX9 752 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 PTPRN2Q92932 1015 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 HAUS1Q96CS2 278 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 IRX2Q9BZI1 471 aaPredicted RBP7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 SLC39A8Q9C0K1 460 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 PRDM16Q9HAZ2 1276 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 EBF1Q9UH73 591 aa7.4□□□□□ -1.22
DEPDC1B-201ENST00000265036 INTUQ9ULD6 942 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms