RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 OR56A5P0C7T3 313 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 HDCP19113 662 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 SERPINA4P29622 427 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 FLT3P36888 993 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 NAGLUP54802 743 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 FNDC5Q8NAU1 212 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 DPY30Q9C005 99 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 KCNK4Q9NYG8 393 aa14.21□□□□□ -0.13
CDH3-201ENST00000264012 MAGEA13PA6NCF6 341 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 A8MX80 341 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 ATP6V1G2O95670 118 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 CSH1P0DML2 217 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 CSH2P0DML3 217 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 KPNB1Q14974 876 aaKnown RBP14.21□□□□□ -0.14
CDH3-201ENST00000264012 MON1BQ7L1V2 547 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 TRMT11Q7Z4G4 463 aaKnown RBP14.21□□□□□ -0.14
CDH3-201ENST00000264012 SLC51AQ86UW1 340 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 XYLT1Q86Y38 959 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 ZNF786Q8N393 782 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 C12orf42Q96LP6 360 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 PANX3Q96QZ0 392 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 PTPRHQ9HD43 1115 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 SALL4Q9UJQ4 1053 aa14.21□□□□□ -0.14
CDH3-201ENST00000264012 R3HDM2Q9Y2K5 976 aaKnown RBP14.21□□□□□ -0.14
CDH3-201ENST00000264012 MEI4A8MW99 385 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 KPNA3O00505 521 aaPredicted RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 GRK3P35626 688 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 MSLNQ13421 630 aaPredicted RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 STRADAQ7RTN6 431 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 SYTL1Q8IYJ3 562 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 MCOLN3Q8TDD5 553 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 SEMA3CQ99985 751 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 SAR1AQ9NR31 198 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 TSPAN1O60635 241 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 RANBP1P43487 201 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 WASHC2DQ5SRD0 308 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 RIPOR1Q6ZS17 1223 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 SNX32Q86XE0 403 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 BBS7Q8IWZ6 715 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 NETO2Q8NC67 525 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 FAM120BQ96EK7 910 aaKnown RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 COPS7BQ9H9Q2 264 aaPredicted RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 CROTQ9UKG9 612 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 STARD13Q9Y3M8 1113 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 COL14A1Q05707 1796 aaKnown RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 IFRD1O00458 451 aaPredicted RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 ALDH1A2O94788 518 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 CHI3L1P36222 383 aaPredicted RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 POLR2LP62875 67 aaKnown RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 XRCC4Q13426 336 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 USP41Q3LFD5 358 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 EXOC3L1Q86VI1 746 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 DENND1CQ8IV53 801 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 STK40Q8N2I9 435 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 PIWIL2Q8TC59 973 aaKnown RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 ZFP42Q96MM3 310 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 SYT17Q9BSW7 474 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 ZCCHC2Q9C0B9 1178 aaKnown RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 HPS4Q9NQG7 708 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 THG1LQ9NWX6 298 aaKnown RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 SPG21Q9NZD8 308 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 NDUFAF1Q9Y375 327 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 CARNS1A5YM72 827 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 AVILO75366 819 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 ATP5BP06576 529 aaKnown RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 RPL14P50914 215 aaKnown RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 IL2P60568 153 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 MILR1Q7Z6M3 343 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 PLD3Q8IV08 490 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 FCRL2Q96LA5 508 aaPredicted RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 PIF1Q9H611 641 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 FBXO6Q9NRD1 293 aaPredicted RBP14.2□□□□□ -0.14
CDH3-201ENST00000264012 ZNF112Q9UJU3 913 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 ADAM28Q9UKQ2 775 aa14.2□□□□□ -0.14
CDH3-201ENST00000264012 MRASO14807 208 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 MLNP12872 115 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 ITGA7Q13683 1181 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 PPP4R4Q6NUP7 873 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 IZUMO2Q6UXV1 221 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 MED8Q96G25 268 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 P2RY11Q96G91 374 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 ALG9Q9H6U8 611 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 IMPAD1Q9NX62 359 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 EFR3BQ9Y2G0 817 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 TCRBV9S1A1TA0A576 114 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 LRCH4O75427 683 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 LTA4HP09960 611 aaKnown RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 MBTD1Q05BQ5 628 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 NOMO1Q15155 1222 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 CCDC149Q6ZUS6 474 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 LRRC8DQ7L1W4 858 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 ADCK1Q86TW2 530 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 MON1AQ86VX9 555 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 SLC41A1Q8IVJ1 513 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 LRRC57Q8N9N7 239 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 B4GALNT2Q8NHY0 566 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 ASB2Q96Q27 587 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 CCDC167Q9P0B6 97 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 H2AFY2Q9P0M6 372 aaPredicted RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 SFMBT1Q9UHJ3 866 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms