RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 MPP4Q96JB8 637 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 DHRS4Q9BTZ2 278 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 DRC3Q9H069 523 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 Q9H521 79 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 UGT1A7Q9HAW7 530 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 UGT1A10Q9HAW8 530 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 UGT1A8Q9HAW9 530 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 CLIC5Q9NZA1 410 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 MFHAS1Q9Y4C4 1052 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 HADHAP40939 763 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 CWF19L1Q69YN2 538 aaKnown RBP16.6■□□□□ 0.25
CTCF-201ENST00000264010 CCNYL1Q8N7R7 359 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 ACBD6Q9BR61 282 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 MAGEB5Q9BZ81 275 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 MCM3APO60318 1980 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 MMEL1Q495T6 779 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 ACAD11Q709F0 780 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 SCG3Q8WXD2 468 aaKnown RBP16.59■□□□□ 0.25
CTCF-201ENST00000264010 OLFM3Q96PB7 478 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 RBM22Q9NW64 420 aaKnown RBP eCLIP16.59■□□□□ 0.25
CTCF-201ENST00000264010 CORO1CQ9ULV4 474 aaPredicted RBP16.59■□□□□ 0.25
CTCF-201ENST00000264010 COMMD10Q9Y6G5 202 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 GOLGA8QA0A0J9YX86 632 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 GOLGA8OA6NCC3 632 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 GOLGA8NF8WBI6 632 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 VAV1P15498 845 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 CDK7P50613 346 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 PAFAH1B3Q15102 231 aaKnown RBP16.59■□□□□ 0.25
CTCF-201ENST00000264010 GEN1Q17RS7 908 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 TEX44Q53QW1 395 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 MAP3K21Q5TCX8 1036 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 DCLRE1AQ6PJP8 1040 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 C7orf26Q96N11 449 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 FICDQ9BVA6 458 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 CRTAC1Q9NQ79 661 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 TMPRSS4Q9NRS4 437 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 ARMCX1Q9P291 453 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 BCAP29Q9UHQ4 241 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 A0A096LPK6 155 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 NRP1O14786 923 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 DGKIO75912 1065 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 AP2A1O95782 977 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 PTPN3P26045 913 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 TUBP50607 506 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 TIGD5Q53EQ6 642 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 ARRDC4Q8NCT1 418 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 KHSRPQ92945 711 aaKnown RBP eCLIP16.59■□□□□ 0.25
CTCF-201ENST00000264010 PABPC5Q96DU9 382 aaKnown RBP16.59■□□□□ 0.25
CTCF-201ENST00000264010 PPP1R10Q96QC0 940 aaKnown RBP16.59■□□□□ 0.25
CTCF-201ENST00000264010 TAGLN3Q9UI15 199 aa16.59■□□□□ 0.25
CTCF-201ENST00000264010 FGF10O15520 208 aaPredicted RBP16.58■□□□□ 0.25
CTCF-201ENST00000264010 ZBTB24O43167 697 aaPredicted RBP16.58■□□□□ 0.25
CTCF-201ENST00000264010 RTN3O95197 1032 aaPredicted RBP16.58■□□□□ 0.25
CTCF-201ENST00000264010 ITGA9Q13797 1035 aa16.58■□□□□ 0.25
CTCF-201ENST00000264010 PCSK7Q16549 785 aa16.58■□□□□ 0.25
CTCF-201ENST00000264010 PDPK2PQ6A1A2 396 aa16.58■□□□□ 0.25
CTCF-201ENST00000264010 TTC8Q8TAM2 541 aa16.58■□□□□ 0.25
CTCF-201ENST00000264010 SMOQ99835 787 aa16.58■□□□□ 0.25
CTCF-201ENST00000264010 FBXO6Q9NRD1 293 aaPredicted RBP16.58■□□□□ 0.25
CTCF-201ENST00000264010 PTGESO14684 152 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 GMNNO75496 209 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 MAGEA6P43360 314 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 ESRRGP62508 458 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 PITX1P78337 314 aaPredicted RBP16.58■□□□□ 0.24
CTCF-201ENST00000264010 OR6P1Q8NGX9 317 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 AGR3Q8TD06 166 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 SERPINB11Q96P15 392 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 THTPAQ9BU02 230 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 DCLRE1BQ9H816 532 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 RBMX2Q9Y388 322 aaKnown RBP16.58■□□□□ 0.24
CTCF-201ENST00000264010 RLFQ13129 1914 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 SF3B1O75533 1304 aaKnown RBP eCLIP16.58■□□□□ 0.246e-6■■■■■ 75.8
CTCF-201ENST00000264010 HAS3O00219 553 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 BEST1O76090 585 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 HCAR3P49019 387 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 DQX1Q8TE96 717 aaKnown RBP16.58■□□□□ 0.24
CTCF-201ENST00000264010 SLC2A13Q96QE2 648 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 FLRT1Q9NZU1 646 aa16.58■□□□□ 0.24
CTCF-201ENST00000264010 H2AFYO75367 372 aaKnown RBP16.57■□□□□ 0.24
CTCF-201ENST00000264010 LRIG2O94898 1065 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 CCNB1P14635 433 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 FLT3LGP49771 235 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 PRKD1Q15139 912 aaPredicted RBP16.57■□□□□ 0.24
CTCF-201ENST00000264010 BRMS1LQ5PSV4 323 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 GDF6Q6KF10 455 aaPredicted RBP16.57■□□□□ 0.24
CTCF-201ENST00000264010 IFNL1Q8IU54 200 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 ATP6V0D2Q8N8Y2 350 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 PIWIL2Q8TC59 973 aaKnown RBP16.57■□□□□ 0.24
CTCF-201ENST00000264010 WDR60Q8WVS4 1066 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 ARHGEF38Q9NXL2 777 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.57■□□□□ 0.24
CTCF-201ENST00000264010 PRAMEP78395 509 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 CCDC142Q17RM4 750 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 SLC39A12Q504Y0 691 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 TAC4Q86UU9 113 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 CALML6Q8TD86 181 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 IFT43Q96FT9 208 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 ELMO2Q96JJ3 720 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 GBA3Q9H227 469 aa16.57■□□□□ 0.24
CTCF-201ENST00000264010 CCDC68Q9H2F9 335 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms