RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 FAM182BQ5T319 152 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 ITPRIPL1Q6GPH6 555 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 PLD6Q8N2A8 252 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 LRTOMTQ8WZ04 291 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 TWNKQ96RR1 684 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 ACE2Q9BYF1 805 aaPredicted RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 DNAI2Q9GZS0 605 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 PAIP1Q9H074 479 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 RAB6CQ9H0N0 254 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 UPF3AQ9H1J1 476 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 DHX35Q9H5Z1 703 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 VRTNQ9H8Y1 702 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 SYBUQ9NX95 663 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 GTF2IRD1Q9UHL9 959 aa12.61□□□□□ -0.39
CHMP2B-201ENST00000263780 DYTNA2CJ06 578 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 TCAF2A6NFQ2 919 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 C9IYK1 514 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 VWA5AO00534 786 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 MAFO75444 373 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 BAIAP3O94812 1187 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 DDHD2O94830 711 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 C2P06681 752 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 TCN1P20061 433 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 DPP6P42658 865 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 MAGEA10P43363 369 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 TARBP2Q15633 366 aaKnown RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 CCDC92Q53HC0 331 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 ARL13AQ5H913 290 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 FAM182AQ5T1J6 154 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 C1QTNF12Q5T7M4 302 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 BSPRYQ5W0U4 402 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 FAM160B1Q5W0V3 765 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 TTC33Q6PID6 262 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 ZNF354CQ86Y25 554 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 HERC6Q8IVU3 1022 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 COLGALT2Q8IYK4 626 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 MYO1HQ8N1T3 1032 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 C12orf43Q96C57 262 aaKnown RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 ZNF512Q96ME7 567 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 SEMA6AQ9H2E6 1030 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 C8orf4Q9NR00 106 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 NSMCE4AQ9NXX6 385 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 DTLQ9NZJ0 730 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 TCRBV3S1A0A5B6 114 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 MAGEB16A2A368 324 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 PSMD12O00232 456 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 GIPC1O14908 333 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 NOL3O60936 208 aaKnown RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 CHRNGP07510 517 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 PDGFRBP09619 1106 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 OCM2P0CE71 109 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 OCMP0CE72 109 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 ARL4AP40617 200 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 PTPN9P43378 593 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 ATXN3P54252 364 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 IFRD2Q12894 506 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 ZBTB17Q13105 803 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 MPP3Q13368 585 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 DPH6Q7L8W6 267 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 AFAP1L2Q8N4X5 818 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 TFAP2CQ92754 450 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 CSPG4P5Q96PW8 444 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 TMEM39BQ9GZU3 492 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 BFARQ9NZS9 450 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 RCOR3Q9P2K3 495 aaPredicted RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 SIX4Q9UIU6 781 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 COQ6Q9Y2Z9 468 aa12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 COPG1Q9Y678 874 aaKnown RBP12.6□□□□□ -0.39
CHMP2B-201ENST00000263780 A0A1B0GTW7 788 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 STX16-NPEPL1H3BU86 382 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 BOLA2-SMG1P6H3BVE0 249 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 AMHP03971 560 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 BMP2P12643 396 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 OAZ1P54368 228 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 NME5P56597 212 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 TMEM132AQ24JP5 1023 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 NHSL2Q5HYW2 709 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 SAMD4BQ5PRF9 694 aaKnown RBP12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 ELMSAN1Q6PJG2 1045 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 OLFML1Q6UWY5 402 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 CAMK1DQ8IU85 385 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 ZNF513Q8N8E2 541 aaPredicted RBP12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 MFSD2AQ8NA29 543 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 FAM47BQ8NA70 645 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 CXorf38Q8TB03 319 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 LRRN4Q8WUT4 740 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 PPWD1Q96BP3 646 aaKnown RBP12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 FAR2Q96K12 515 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 TCF12Q99081 682 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 MPHOSPH6Q99547 160 aaKnown RBP12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 NPAS2Q99743 824 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 TASP1Q9H6P5 420 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 HESX1Q9UBX0 185 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 TSPAN16Q9UKR8 245 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 SARDHQ9UL12 918 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 AP4E1Q9UPM8 1137 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms