RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ZNF534Q76KX8 674 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 CAND1Q86VP6 1230 aaKnown RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 TDHQ8IZJ6 230 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 ARHGEF2Q92974 986 aaKnown RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 CDCA3Q99618 268 aaPredicted RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 WDR83Q9BRX9 315 aaKnown RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 MAGEH1Q9H213 219 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 TBC1D30Q9Y2I9 924 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 J3KR12 359 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 BANF1O75531 89 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 ACSL3O95573 720 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 NFKB1P19838 968 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 ACVRL1P37023 503 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 MAGEA3P43357 314 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 EIF3BP55884 814 aaKnown RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 C6orf118Q5T5N4 469 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 SETD3Q86TU7 594 aaPredicted RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 KLHDC8BQ8IXV7 354 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 ZBED8Q8IZ13 594 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 KRT222Q8N1A0 295 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 CPXM2Q8N436 756 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 PDCD7Q8N8D1 485 aaKnown RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 HJURPQ8NCD3 748 aaPredicted RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 OR52K2Q8NGK3 314 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 USP33Q8TEY7 942 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 TTC25Q96NG3 672 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 SMG9Q9H0W8 520 aaKnown RBP23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 ZMYM5Q9UJ78 669 aa23.38■■□□□ 1.33
SMARCB1-201ENST00000263121 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 ZNF197O14709 1029 aa23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 OPA1O60313 960 aa23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 SHBGP04278 402 aa23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 AVPR1AP37288 418 aa23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 GNA12Q03113 381 aa23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 IL10RBQ08334 325 aa23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 ZNF177Q13360 481 aaPredicted RBP23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 HNRNPDQ14103 355 aaKnown RBP23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 BBS7Q8IWZ6 715 aa23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 SH3RF2Q8TEC5 729 aa23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 MRPL38Q96DV4 380 aaKnown RBP23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 SP110Q9HB58 689 aa23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 CCL26Q9Y258 94 aa23.37■■□□□ 1.33
SMARCB1-201ENST00000263121 ILVBLA1L0T0 632 aa23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 RFXAPO00287 272 aa23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 LMAN1P49257 510 aa23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 BBS9Q3SYG4 887 aa23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 C12orf76Q8N812 135 aaPredicted RBP23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 SMG7Q92540 1137 aaKnown RBP23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 USP13Q92995 863 aaPredicted RBP23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 TIFAQ96CG3 184 aa23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 SFXN1Q9H9B4 322 aa23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 XAB2Q9HCS7 855 aaKnown RBP23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 MYO18AQ92614 2054 aaKnown RBP23.36■■□□□ 1.33
SMARCB1-201ENST00000263121 A0A0D9SEW6 157 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 E2F8A0AVK6 867 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 PRAMEF11O60813 436 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 TBL1XO60907 577 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 AVILO75366 819 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 HLA-DQB2P05538 268 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 ABHD2P08910 425 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 HOXD9P28356 352 aaPredicted RBP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 IFNAR2P48551 515 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 TNK2Q07912 1038 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 HSP90B2PQ58FF3 399 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 HP1BP3Q5SSJ5 553 aaPredicted RBP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 CEP85LQ5SZL2 805 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 KCTD11Q693B1 232 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 CXorf57Q6NSI4 855 aaKnown RBP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 AGGF1Q8N302 714 aaeCLIP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 TEX26Q8N6G2 289 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 TMA16Q96EY4 203 aaKnown RBP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 MLPHQ9BV36 600 aaPredicted RBP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 PDFQ9HBH1 243 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 GLOD4Q9HC38 313 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 RBM22Q9NW64 420 aaKnown RBP eCLIP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 TEX264Q9Y6I9 313 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 TRANK1O15050 2925 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 ERI2A8K979 691 aaKnown RBP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 SUN1O94901 812 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 AP2A1O95782 977 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 RHOCP08134 193 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 MLNP12872 115 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 CEBPBP17676 345 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 GRIA1P42261 906 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 RENBPP51606 427 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 SARNPP82979 210 aaKnown RBP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 MTM1Q13496 603 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 POTEHQ6S545 545 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 ZNF354CQ86Y25 554 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 ANKMY2Q8IV38 441 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 OR7D4Q8NG98 312 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 UHMK1Q8TAS1 419 aaKnown RBP23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 RIN3Q8TB24 985 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 FCRL5Q96RD9 977 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 TMEM109Q9BVC6 243 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 PIDD1Q9HB75 910 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 LRRC4CQ9HCJ2 640 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 TDP1Q9NUW8 608 aa23.35■■□□□ 1.33
SMARCB1-201ENST00000263121 DZANK1Q9NVP4 752 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms