RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TBCBQ99426 244 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 NDNQ99608 321 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 MRPS26Q9BYN8 205 aaKnown RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PRKD2Q9BZL6 878 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 REXO4Q9GZR2 422 aaKnown RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 BLOC1S4Q9NUP1 217 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 HACD1B0YJ81 288 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PTGES3LE9PB15 166 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ZBTB14O43829 449 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PTPN1P18031 435 aaKnown RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 LBPP18428 481 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 AXLP30530 894 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 TALDO1P37837 337 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 CACNA2D1P54289 1103 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 RAD23AP54725 363 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PFKPQ01813 784 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PFKFB4Q16877 469 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PRMT9Q6P2P2 845 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 FBXL19Q6PCT2 694 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 REPS1Q96D71 796 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ASB7Q9H672 318 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 VPS45Q9NRW7 570 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 MRPL17Q9NRX2 175 aaKnown RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 INVSQ9Y283 1065 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 VAV1P15498 845 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 IGFBP4P22692 258 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 CRATP43155 626 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PRKAG1P54619 331 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 MYBPC2Q14324 1141 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 FAM83AQ86UY5 434 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 BHLHE22Q8NFJ8 381 aaPredicted RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 FBXO30Q8TB52 745 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ABCG8Q9H221 673 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 GDF3Q9NR23 364 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 RRN3Q9NYV6 651 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 UXTQ9UBK9 157 aaPredicted RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 KLQ9UEF7 1012 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PCDHA11Q9Y5I1 949 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PCDHAC2Q9Y5I4 1007 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PABPC1P11940 636 aaKnown RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 TSPAN8P19075 237 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 UBA1P22314 1058 aaKnown RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 INSCQ1MX18 579 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 SLC44A4Q53GD3 710 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 CACTIN-AS1Q8N1I8 211 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 SPATA6LQ8N4H0 392 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ITFG1Q8TB96 612 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ELMO1Q92556 727 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 COL26A1Q96A83 441 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ZCCHC2Q9C0B9 1178 aaKnown RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ABCC13Q9NSE7 274 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 COG5Q9UP83 839 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 MANSC4A6NHS7 340 aaPredicted RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ZNF839A8K0R7 811 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 XYLBO75191 536 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 PTPRAP18433 802 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 OSCP1Q8WVF1 389 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 CLIP3Q96DZ5 547 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 FUCA2Q9BTY2 467 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 POLR1EQ9GZS1 481 aaKnown RBP12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ABHD16BQ9H3Z7 469 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 TMPRSS4Q9NRS4 437 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 MARCH2Q9P0N8 246 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 SATB2Q9UPW6 733 aa12.28□□□□□ -0.44
COL8A1-201ENST00000261037 ZMPSTE24O75844 475 aa12.27□□□□□ -0.44
COL8A1-201ENST00000261037 PIGNO95427 931 aa12.27□□□□□ -0.44
COL8A1-201ENST00000261037 ADRM1Q16186 407 aa12.27□□□□□ -0.44
COL8A1-201ENST00000261037 APOBEC3HQ6NTF7 200 aaKnown RBP12.27□□□□□ -0.44
COL8A1-201ENST00000261037 USP45Q70EL2 814 aa12.27□□□□□ -0.44
COL8A1-201ENST00000261037 TMPRSS6Q8IU80 811 aa12.27□□□□□ -0.44
COL8A1-201ENST00000261037 TERB1Q8NA31 727 aa12.27□□□□□ -0.44
COL8A1-201ENST00000261037 GPR152Q8TDT2 470 aa12.27□□□□□ -0.44
COL8A1-201ENST00000261037 CYLDQ9NQC7 956 aa12.27□□□□□ -0.44
COL8A1-201ENST00000261037 C1orf232A0A0U1RR37 186 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 WTIPA6NIX2 430 aaPredicted RBP12.27□□□□□ -0.45
COL8A1-201ENST00000261037 HLA-DQA2P01906 255 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 RPLP2P05387 115 aaKnown RBP12.27□□□□□ -0.45
COL8A1-201ENST00000261037 HK2P52789 917 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 MARSP56192 900 aaKnown RBP12.27□□□□□ -0.45
COL8A1-201ENST00000261037 AMPD2Q01433 879 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 PPP3CAQ08209 521 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 TRMT5Q32P41 509 aaKnown RBP12.27□□□□□ -0.45
COL8A1-201ENST00000261037 CCDC149Q6ZUS6 474 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 KIAA0319LQ8IZA0 1049 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 APBB2Q92870 758 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 ADI1Q9BV57 179 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 MRPL9Q9BYD2 267 aaKnown RBP12.27□□□□□ -0.45
COL8A1-201ENST00000261037 TRIM8Q9BZR9 551 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 OR12D3Q9UGF7 316 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 SLC27A5Q9Y2P5 690 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 GPSM3Q9Y4H4 160 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 TBL1XO60907 577 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 SHBGP04278 402 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 SMIM10L2AP0DMW4 78 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 SMIM10L2BP0DMW5 78 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 PPIL2Q13356 520 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 TRIQKQ629K1 86 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 CXorf40AQ8TE69 158 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 PYDC1Q8WXC3 89 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 OMDQ99983 421 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms