RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 TSPAN3O60637 253 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZBTB7AO95365 584 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 ALOX5P09917 674 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 PEX6Q13608 980 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 FRG1Q14331 258 aaKnown RBP9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 TSNQ15631 228 aaKnown RBP9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZFP69Q49AA0 526 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 XRRA1Q6P2D8 792 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 SLC22A9Q8IVM8 553 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 AMER2Q8N7J2 671 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 FAM45AQ8TCE6 357 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 VCPIP1Q96JH7 1222 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 FAM84AQ96KN4 292 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 CIB1Q99828 191 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 CPNE1Q99829 537 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 PCDHGA3Q9Y5H0 932 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 RIMS1Q86UR5 1692 aaKnown RBP9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZC3H4Q9UPT8 1303 aaKnown RBP9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 RGSL1A5PLK6 1076 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 H3BN98 237 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 MYL12BO14950 172 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 ASMTLO95671 621 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 TSPAN19P0C672 248 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 TPBGLP0DKB5 382 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 TAF6P49848 677 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 LGALS3BPQ08380 585 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 SNX17Q15036 470 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 ANGEL2Q5VTE6 544 aaKnown RBP9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 ARHGAP36Q6ZRI8 547 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 SAMD7Q7Z3H4 446 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 C16orf62Q7Z3J2 963 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 NPAS2Q99743 824 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 ZFYVE28Q9HCC9 887 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 KCNMB3Q9NPA1 279 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 CDH9Q9ULB4 789 aa9.9□□□□□ -0.82
CTDSPL2-201ENST00000260327 CYP2C8P10632 490 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 MAPTP10636 758 aaKnown RBP9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 KDELR1P24390 212 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 NDST1P52848 882 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 NAGLUP54802 743 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 AQP4P55087 323 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 HPCAP84074 193 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 ITGA7Q13683 1181 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 PGM5Q15124 567 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 YME1L1Q96TA2 773 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 AAR2Q9Y312 384 aaKnown RBP9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 TCRBV7S2A1N4TA0A589 114 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 PLA2G6O60733 806 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 IRF1P10914 325 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 FUT2Q10981 343 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 NEK5Q6P3R8 708 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 TMEM110Q86TL2 294 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 TRABD2AQ86V40 505 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 TNFRSF25Q93038 417 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 PREBQ9HCU5 417 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 PRKAG3Q9UGI9 489 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 ZNF221Q9UK13 617 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 RIC1Q4ADV7 1423 aa9.9□□□□□ -0.83
CTDSPL2-201ENST00000260327 CNTNAP4Q9C0A0 1308 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TTLL13PA6NNM8 815 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 SYNCRIPO60506 623 aaKnown RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 NOL4O94818 638 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TSPAN8P19075 237 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 GLRA2P23416 452 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 SLC26A3P40879 764 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 SPIRE1Q08AE8 756 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 CCNIQ14094 377 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 KCNT2Q6UVM3 1135 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 HTR3CQ8WXA8 447 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 CENPIQ92674 756 aaPredicted RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 PDCD2LQ9BRP1 358 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 MYOZ2Q9NPC6 264 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 SPAG4Q9NPE6 437 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TOR4AQ9NXH8 423 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 SORCS3Q9UPU3 1222 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 MATN2O00339 956 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 GUCY1B2O75343 617 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 CNPP09543 421 aaKnown RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 GSCP56915 257 aaPredicted RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 C15orf59Q2T9L4 293 aaPredicted RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 MZT2BQ6NZ67 158 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 KIAA0408Q6ZU52 694 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 FAM71AQ8IYT1 594 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TNS4Q8IZW8 715 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 FOPNLQ96NB1 174 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 WDR12Q9GZL7 423 aaKnown RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 DEFB129Q9H1M3 183 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TRPV5Q9NQA5 729 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TMEM131LA2VDJ0 1609 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 PLOD3O60568 738 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TMCC2O75069 709 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 CYP4B1P13584 511 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 RXRBP28702 533 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 RPL22P35268 128 aaKnown RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 CD151P48509 253 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 RPL7AP62424 266 aaKnown RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 SLC1A5Q15758 541 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 PTPN20Q4JDL3 420 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 CASP12Q6UXS9 341 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 GATAD2AQ86YP4 633 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms