RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 RNF157Q96PX1 679 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 PHF7Q9BWX1 381 aaPredicted RBP12.4□□□□□ -0.42
NIP7-201ENST00000254940 KCNK12Q9HB15 430 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 TBK1Q9UHD2 729 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 SLC12A6Q9UHW9 1150 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 ACTL7AQ9Y615 435 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 DOCK4Q8N1I0 1966 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 BDP1A6H8Y1 2624 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 F5H5T6 163 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 MLLT6P55198 1093 aaPredicted RBP12.4□□□□□ -0.42
NIP7-201ENST00000254940 USP4Q13107 963 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 HTR4Q13639 388 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 MSS51Q4VC12 460 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 FSCBQ5H9T9 825 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 BRMS1LQ5PSV4 323 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 ARTNQ5T4W7 220 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 ADGRF1Q5T601 910 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 HIBCHQ6NVY1 386 aaPredicted RBP12.4□□□□□ -0.42
NIP7-201ENST00000254940 C12orf40Q86WS4 652 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 ANKMY2Q8IV38 441 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 CSPG4P5Q96PW8 444 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 RBM15Q96T37 977 aaKnown RBP eCLIP12.4□□□□□ -0.42
NIP7-201ENST00000254940 THEGQ9P2T0 379 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 TTC28Q96AY4 2481 aa12.4□□□□□ -0.42
NIP7-201ENST00000254940 APOC4-APOC2K7ER74 178 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 AVILO75366 819 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 PAPLNO95428 1278 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 APOC2P02655 101 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 NR1D1P20393 614 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 CD72P21854 359 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 RPL22P35268 128 aaKnown RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 SLC6A11P48066 632 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 IFNAR2P48551 515 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 BOLA3Q53S33 107 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 ZNF354CQ86Y25 554 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 NPWQ8N729 165 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 P3H4Q92791 437 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 NKD2Q969F2 451 aaPredicted RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 RUNDC3BQ96NL0 473 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 LGMNQ99538 433 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 PRMT1Q99873 361 aaKnown RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 HOMER3Q9NSC5 361 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 PIH1D1Q9NWS0 290 aaKnown RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 FEZ2Q9UHY8 353 aaPredicted RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 GOLGA6L10A6NI86 522 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 CYP17A1P05093 508 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 ITGAVP06756 1048 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 SLC2A3P11169 496 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 RBL1P28749 1068 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 PTPN7P35236 360 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 BASP1P80723 227 aaKnown RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 KDSRQ06136 332 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 RING1Q06587 406 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 SF3A3Q12874 501 aaKnown RBP eCLIP12.39□□□□□ -0.433e-7■■■□□ 16.9
NIP7-201ENST00000254940 OLIG2Q13516 323 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 DARS2Q6PI48 645 aaKnown RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 ARHGAP36Q6ZRI8 547 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 RFX8Q6ZV50 586 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 HTR3DQ70Z44 454 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 CCDC13Q8IYE1 715 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 ADGRG2Q8IZP9 1017 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 HPS4Q9NQG7 708 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 NINJ2Q9NZG7 142 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 NEU3Q9UQ49 428 aa12.39□□□□□ -0.43
NIP7-201ENST00000254940 MYO18AQ92614 2054 aaKnown RBP12.39□□□□□ -0.43
NIP7-201ENST00000254940 H7C0C1 242 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 DNALI1O14645 258 aaPredicted RBP12.38□□□□□ -0.43
NIP7-201ENST00000254940 TMEM63AO94886 807 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 PSMC3P17980 439 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 ERCC2P18074 760 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 ATP5OP48047 213 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 KPNA1P52294 538 aaPredicted RBP12.38□□□□□ -0.43
NIP7-201ENST00000254940 GNGT1P63211 74 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 ACAP1Q15027 740 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 FNBP1LQ5T0N5 605 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 RNASEH2BQ5TBB1 312 aaKnown RBP12.38□□□□□ -0.43
NIP7-201ENST00000254940 ASTLQ6HA08 431 aaPredicted RBP12.38□□□□□ -0.43
NIP7-201ENST00000254940 LRIG3Q6UXM1 1119 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 ZNF276Q8N554 614 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 CPT1BQ92523 772 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 WDR83Q9BRX9 315 aaKnown RBP12.38□□□□□ -0.43
NIP7-201ENST00000254940 BRD9Q9H8M2 597 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 SAYSD1Q9NPB0 183 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 CD320Q9NPF0 282 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 ARHGEF4Q9NR80 690 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 A0A0D9SEW6 157 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 E2F8A0AVK6 867 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 GLDCP23378 1020 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 ARL4AP40617 200 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 SEC24CP53992 1094 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 DHCR24Q15392 516 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 SMAD1Q15797 465 aaKnown RBP12.38□□□□□ -0.43
NIP7-201ENST00000254940 DPYSL2Q16555 572 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 EML3Q32P44 896 aa12.38□□□□□ -0.43
NIP7-201ENST00000254940 DRICH1Q6PGQ1 229 aaPredicted RBP12.38□□□□□ -0.43
NIP7-201ENST00000254940 LRRC31Q6UY01 552 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms