RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 TTC17Q96AE7 1141 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 SEMA3CQ99985 751 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 ZNF670Q9BS34 389 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 HTATIP2Q9BUP3 242 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 PBX4Q9BYU1 374 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 SQORQ9Y6N5 450 aa11.9□□□□□ -0.5
LIN28A-201ENST00000254231 LINC01553A4QN01 128 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 TUBBP07437 444 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 SLC6A4P31645 630 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 SERPINB6P35237 376 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 ZSCAN26Q16670 478 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 FSCBQ5H9T9 825 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 MARC1Q5VT66 337 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 NAIF1Q69YI7 327 aaPredicted RBP11.9□□□□□ -0.51
LIN28A-201ENST00000254231 GAREM2Q75VX8 874 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 CPLX4Q7Z7G2 160 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 MFN1Q8IWA4 741 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 NIPA2Q8N8Q9 360 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 OR52K2Q8NGK3 314 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 SERPINB12Q96P63 405 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 CATSPERBQ9H7T0 1116 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 CLDND1Q9NY35 253 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 AFF4Q9UHB7 1163 aaKnown RBP11.9□□□□□ -0.51
LIN28A-201ENST00000254231 CLEC4EQ9ULY5 219 aa11.9□□□□□ -0.51
LIN28A-201ENST00000254231 OR51F1A6NGY5 319 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 GPR39O43194 453 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 RTN3O95197 1032 aaPredicted RBP11.89□□□□□ -0.51
LIN28A-201ENST00000254231 KITP10721 976 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 STIP1P31948 543 aaKnown RBP11.89□□□□□ -0.51
LIN28A-201ENST00000254231 STK19P49842 368 aaPredicted RBP11.89□□□□□ -0.51
LIN28A-201ENST00000254231 PTK6Q13882 451 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
LIN28A-201ENST00000254231 PCDH9Q9HC56 1237 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 PAK5Q9P286 719 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 MTRRQ9UBK8 725 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 KCTD3Q9Y597 815 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 TYW5A2RUC4 315 aaKnown RBP11.89□□□□□ -0.51
LIN28A-201ENST00000254231 H0YGN5 161 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 VAPBO95292 243 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 TTC4O95801 387 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 TACR2P21452 398 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 SLC8A1P32418 973 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 CCR2P41597 374 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 CTBP1Q13363 440 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 BCAS4Q8TDM0 211 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 CYB5D2Q8WUJ1 264 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 IFT43Q96FT9 208 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 ELAC1Q9H777 363 aaKnown RBP11.89□□□□□ -0.51
LIN28A-201ENST00000254231 CAB39LQ9H9S4 337 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 USP29Q9HBJ7 922 aa11.89□□□□□ -0.51
LIN28A-201ENST00000254231 CPSF2Q9P2I0 782 aaKnown RBP11.89□□□□□ -0.51
LIN28A-201ENST00000254231 UBA6A0AVT1 1052 aaPredicted RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 BMPR1AP36894 532 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 MLLT6P55198 1093 aaPredicted RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 COPS2P61201 443 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 ALS2CLQ60I27 953 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 TDRD5Q8NAT2 981 aaKnown RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 PPP1R14CQ8TAE6 165 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 SH3RF2Q8TEC5 729 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 PIK3R5Q8WYR1 880 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 ART4Q93070 314 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 ABHD8Q96I13 439 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 BBS2Q9BXC9 721 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 EMILIN2Q9BXX0 1053 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 ZYG11BQ9C0D3 744 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 EBF3Q9H4W6 596 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 FAM96AQ9H5X1 160 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 C20orf96Q9NUD7 363 aaPredicted RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 SYBUQ9NX95 663 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 MARCOQ9UEW3 520 aaPredicted RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 TDRD15B5MCY1 1934 aaKnown RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 WASH3PC4AMC7 463 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 CXCL10P02778 98 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 IVDP26440 423 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 PCGF5Q86SE9 256 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 GPATCH11Q8N954 259 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 ZSWIM3Q96MP5 696 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 POLR3BQ9NW08 1133 aaPredicted RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 MOSPD1Q9UJG1 213 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 ZFHX2Q9C0A1 2572 aaPredicted RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 CXorf49A8MYA2 514 aaPredicted RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 NDUFAB1O14561 156 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 MAP2K7O14733 419 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 ITGAVP06756 1048 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 KRT4P19013 534 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 PTPN3P26045 913 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 COG7P83436 770 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 ZXDBP98169 803 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 Q7L0L9 218 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 BHLHA9Q7RTU4 235 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 ARID3BQ8IVW6 561 aaPredicted RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 SLC2A13Q96QE2 648 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 AGAP2Q99490 1192 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 PRMT1Q99873 361 aaKnown RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 CAPS2Q9BXY5 557 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 CSNK1G1Q9HCP0 422 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 PCMTD2Q9NV79 361 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 BFARQ9NZS9 450 aa11.88□□□□□ -0.51
LIN28A-201ENST00000254231 UXTQ9UBK9 157 aaPredicted RBP11.88□□□□□ -0.51
LIN28A-201ENST00000254231 CRYL1Q9Y2S2 319 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms