RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GTF2A1LQ9UNN4 478 aa13.37□□□□□ -0.27
PCDHGA3-201ENST00000253812 PCDHA3Q9Y5H8 950 aa13.37□□□□□ -0.27
PCDHGA3-201ENST00000253812 GSAPA4D1B5 854 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ACAP2Q15057 778 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 IL31Q6EBC2 164 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 BHLHB9Q6PI77 547 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ANKRD13AQ8IZ07 590 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 MEIOBQ8N635 442 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 AFG1LQ8WV93 481 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 Q96MT0 163 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 NMRAL1Q9HBL8 299 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ANKRD6Q9Y2G4 727 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 CNTNAP5Q8WYK1 1306 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 GARTP22102 1010 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 PKN1Q16512 942 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ATP13A5Q4VNC0 1218 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ZRANB3Q5FWF4 1079 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 PEG10Q86TG7 708 aaKnown RBP13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ZNF518BQ9C0D4 1074 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ATPIF1Q9UII2 106 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 SYNCRIPO60506 623 aaKnown RBP13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 PSIP1O75475 530 aaKnown RBP13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 NELFEP18615 380 aaKnown RBP13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ITIH1P19827 911 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 CRABP2P29373 138 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 BST2Q10589 180 aaKnown RBP13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 NFIAQ12857 509 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 IRF2BPLQ9H1B7 796 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 SH3BP4Q9P0V3 963 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 MTF2Q9Y483 593 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ARHGEF33A8MVX0 844 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ARF5P84085 180 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ST3GAL1Q11201 340 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 FAM131AQ6UXB0 335 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 PHF21BQ96EK2 531 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 SH2D3AQ9BRG2 576 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 HGH1Q9BTY7 390 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 KLHL28Q9NXS3 571 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 PHF11Q9UIL8 331 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 SNX9Q9Y5X1 595 aa13.36□□□□□ -0.27
PCDHGA3-201ENST00000253812 C6orf222P0C671 652 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 SLC2A4P14672 509 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 GPC1P35052 558 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ANGEL2Q5VTE6 544 aaKnown RBP13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 SATL1Q86VE3 508 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 SPAG16Q8N0X2 631 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 TMEM132CQ8N3T6 1108 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 B3GALNT2Q8NCR0 500 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 CLN6Q9NWW5 311 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ARHGAP28Q9P2N2 729 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 CCNT2O60583 730 aaKnown RBP13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 PPP2R1BP30154 601 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 CD151P48509 253 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 NPY2RP49146 381 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 HIRAP54198 1017 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 AMPD2Q01433 879 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 CA9Q16790 459 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 SAMD7Q7Z3H4 446 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ADGRA1Q86SQ6 560 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 CDK20Q8IZL9 346 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 FBXO30Q8TB52 745 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 MAP3K14Q99558 947 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 TBCCD1Q9NVR7 557 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 UBP1Q9NZI7 540 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 LRFN2Q9ULH4 789 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 PTSQ03393 145 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ANKS6Q68DC2 871 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 TMC2Q8TDI7 906 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ZNF668Q96K58 619 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 CPNE1Q99829 537 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ACAT2Q9BWD1 397 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 MED28Q9H204 178 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 PNPLA8Q9NP80 782 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 FBXO6Q9NRD1 293 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 IKZF3Q9UKT9 509 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ABCG2Q9UNQ0 655 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 PLCL2Q9UPR0 1127 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 INVSQ9Y283 1065 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 LRRC10BA6NIK2 292 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ADSLP30566 484 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 GMPSP49915 693 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 GRIK3Q13003 919 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 DCAF6Q58WW2 860 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 PPM1LQ5SGD2 360 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 TWF2Q6IBS0 349 aaKnown RBP13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 PROSER1Q86XN7 944 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 C12orf56Q8IXR9 622 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 TMCO6Q96DC7 493 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ARL8BQ9NVJ2 186 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 PCYOX1Q9UHG3 505 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 PACSIN3Q9UKS6 424 aa13.35□□□□□ -0.27
PCDHGA3-201ENST00000253812 ZNF879B4DU55 563 aa13.34□□□□□ -0.27
PCDHGA3-201ENST00000253812 APOL3O95236 402 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms