RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TRIM38O00635 465 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CHEK2O96017 543 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PRKCBP05771 671 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 COX4I1P13073 169 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TFE3P19532 575 aaPredicted RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 MAGEA8P43361 318 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PTPN9P43378 593 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 GRB14Q14449 540 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TBC1D10BQ4KMP7 808 aaPredicted RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SAMD4BQ5PRF9 694 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 C16orf87Q6PH81 154 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 RINLQ6ZS11 566 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 MAVSQ7Z434 540 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 DPP9Q86TI2 863 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PDSS2Q86YH6 399 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SEPT1Q8WYJ6 367 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TADA1Q96BN2 335 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SNX27Q96L92 541 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SYT15Q9BQS2 421 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 NMUR2Q9GZQ4 415 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CACYBPQ9HB71 228 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 MAGEE1Q9HCI5 957 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ETNK2Q9NVF9 386 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 GGA3Q9NZ52 723 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 NXF1Q9UBU9 619 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 C15orf38-AP3S2A0A0A6YYH1 394 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 A0A1W2PPM1 405 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TARM1B6A8C7 271 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 GJB1P08034 283 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SBK3P0C264 359 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF12P17014 697 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PSMA3P25788 255 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CPOXP36551 454 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 NRLP54845 237 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 FOLH1Q04609 750 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 NAPEPLDQ6IQ20 393 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ARPINQ7Z6K5 226 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SCML4Q8N228 414 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ELMOD1Q8N336 334 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 MARVELD2Q8N4S9 558 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 MINDY2Q8NBR6 621 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PCDH19Q8TAB3 1148 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 RSPH1Q8WYR4 309 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 BORCS5Q969J3 196 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PGAP3Q96FM1 320 aaPredicted RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SERAC1Q96JX3 654 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 CCDC138Q96M89 665 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 C9orf16Q9BUW7 83 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 NT5C1AQ9BXI3 368 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 ALG13Q9NP73 1137 aaKnown RBP4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PALMDQ9NP74 551 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 RRN3Q9NYV6 651 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 PCSK1NQ9UHG2 260 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 TRHDEQ9UKU6 1024 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 SLC8A2Q9UPR5 921 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 RAP2CQ9Y3L5 183 aa4.23□□□□□ -1.73
UBE4A-201ENST00000252108 IQCA1LA6NCM1 817 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 DENRO43583 198 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 FAM163BP0C2L3 166 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 EEF1DP29692 281 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 GRM5P41594 1212 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 CPA2P48052 419 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 NUDT2P50583 147 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 YWHAZP63104 245 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 HP1BP3Q5SSJ5 553 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 RNF220Q5VTB9 566 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PPP4R4Q6NUP7 873 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 DSTYKQ6XUX3 929 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 RNF111Q6ZNA4 994 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 LPCAT2Q7L5N7 544 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SLC22A9Q8IVM8 553 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PGAM4Q8N0Y7 254 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PDCD6IPQ8WUM4 868 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 VOPP1Q96AW1 172 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 CCDC124Q96CT7 223 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ZNF560Q96MR9 790 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 RNF157Q96PX1 679 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SLC2A13Q96QE2 648 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TUBGCP5Q96RT8 1024 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 KLF6Q99612 283 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 OSER1Q9NX31 292 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ADA2Q9NZK5 511 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 KLHL8Q9P2G9 620 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 WDR37Q9Y2I8 494 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 HEY1Q9Y5J3 304 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SNX5Q9Y5X3 404 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 FAM237BA0A1B0GVD1 139 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 HEATR9A2RTY3 570 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 BBIP1A8MTZ0 92 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 C9IYK1 514 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 KPNA4O00629 521 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PPEF2O14830 753 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 CFLARO15519 480 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 VPS4BO75351 444 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 KATNA1O75449 491 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 C7P10643 843 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 KCNE1P15382 129 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PCSK2P16519 638 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 ARF4P18085 180 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms