RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SLC2A3P11169 496 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 PDGFRAP16234 1089 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 CD38P28907 300 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 EPHA8P29322 1005 aaPredicted RBP10.62□□□□□ -0.71
VPS50-201ENST00000251739 RPIAP49247 311 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 NXPH1P58417 271 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 IL9RQ01113 521 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 APBA1Q02410 837 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 CENPCQ03188 943 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 SULT2A1Q06520 285 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 COL9A2Q14055 689 aaPredicted RBP10.62□□□□□ -0.71
VPS50-201ENST00000251739 INAVAQ3KP66 663 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 C5orf22Q49AR2 442 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 FBXL22Q6P050 247 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 GJB7Q6PEY0 223 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 OLFML1Q6UWY5 402 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 SND1Q7KZF4 910 aaKnown RBP eCLIP10.62□□□□□ -0.71
VPS50-201ENST00000251739 ADAT2Q7Z6V5 191 aaKnown RBP10.62□□□□□ -0.71
VPS50-201ENST00000251739 IRF2BP1Q8IU81 584 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 CCDC117Q8IWD4 279 aaPredicted RBP10.62□□□□□ -0.71
VPS50-201ENST00000251739 ATP6V0D2Q8N8Y2 350 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 OR52K2Q8NGK3 314 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 FAM81BQ96LP2 452 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 SPAG5Q96R06 1193 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 OMDQ99983 421 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 ARHGAP20Q9P2F6 1191 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 APEX2Q9UBZ4 518 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 FTSJ1Q9UET6 329 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 RAXQ9Y2V3 346 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 PCDHGA1Q9Y5H4 931 aa10.62□□□□□ -0.71
VPS50-201ENST00000251739 SETXQ7Z333 2677 aaKnown RBP10.62□□□□□ -0.71
VPS50-201ENST00000251739 TRABD2BA6NFA1 517 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 E9PAM4 449 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 I6L893 689 aaPredicted RBP10.61□□□□□ -0.71
VPS50-201ENST00000251739 ALOX15BO15296 676 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 YKT6O15498 198 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 SLC7A4O43246 635 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 PLRG1O43660 514 aaKnown RBP10.61□□□□□ -0.71
VPS50-201ENST00000251739 ATP9BO43861 1147 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 DAB1O75553 588 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 SLC9A1P19634 815 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 CCR1P32246 355 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 RXRGP48443 463 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 C21orf59P57076 290 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 CDK17Q00537 523 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 COL28A1Q2UY09 1125 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 PTPN20Q4JDL3 420 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 RABGAP1LQ5R372 815 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 PRAMEF14Q5SWL7 426 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 ARTNQ5T4W7 220 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 AGBL4Q5VU57 503 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 RNF219Q5W0B1 726 aaPredicted RBP10.61□□□□□ -0.71
VPS50-201ENST00000251739 NAPEPLDQ6IQ20 393 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 DPY19L2P1Q6NXN4 242 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 DHRS13Q6UX07 377 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 SLC26A9Q7LBE3 791 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 PDZD3Q86UT5 571 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 TRIM69Q86WT6 500 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 GATAD2AQ86YP4 633 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 DEFB106AQ8N104 65 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 ZNF397Q8NF99 534 aaPredicted RBP10.61□□□□□ -0.71
VPS50-201ENST00000251739 GANCQ8TET4 914 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 LRRN4Q8WUT4 740 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 SERAC1Q96JX3 654 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 FEM1AQ9BSK4 669 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 CRACR2AQ9BSW2 395 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 FAM204AQ9H8W3 233 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 ERVMER34-1Q9H9K5 563 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 SIX2Q9NPC8 291 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 DDIT4Q9NX09 232 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 RWDD2AQ9UIY3 292 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 AJAP1Q9UKB5 411 aaPredicted RBP10.61□□□□□ -0.71
VPS50-201ENST00000251739 SARDHQ9UL12 918 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 PPM1HQ9ULR3 514 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 TBC1D30Q9Y2I9 924 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 CEP83Q9Y592 693 aa10.61□□□□□ -0.71
VPS50-201ENST00000251739 COL27A1Q8IZC6 1860 aaPredicted RBP10.61□□□□□ -0.71
VPS50-201ENST00000251739 SHROOM3Q8TF72 1996 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 A0A087WV48 116 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 FAM149AA5PLN7 773 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 CBX4O00257 560 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 PLK4O00444 970 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 ENC1O14682 589 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 RTN2O75298 545 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 IL1BP01584 269 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 ERBB2P04626 1255 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 PON1P27169 355 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 NUDT1P36639 197 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 SLC19A1P41440 591 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 ACADVLP49748 655 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 OXCT1P55809 520 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 AUHQ13825 339 aaKnown RBP10.6□□□□□ -0.71
VPS50-201ENST00000251739 BECN1Q14457 450 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 EFHC1Q5JVL4 640 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 C19orf48Q6RUI8 117 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 GBP6Q6ZN66 633 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 FAM183BPQ6ZVS7 135 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 IQCHQ86VS3 1027 aa10.6□□□□□ -0.71
VPS50-201ENST00000251739 TMPRSS12Q86WS5 348 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms