RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ATPAF2Q8N5M1 289 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 PGAP3Q96FM1 320 aaPredicted RBP16.07■□□□□ 0.16
LRFN1-201ENST00000248668 TEKT5Q96M29 485 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 OSER1Q9NX31 292 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 RNF186Q9NXI6 227 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 IRAK2O43187 625 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 ZNF623O75123 536 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 TGDSO95455 350 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 SREBF2Q12772 1141 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 DSC3Q14574 896 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 NOMO2Q5JPE7 1267 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 TRIM68Q6AZZ1 485 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 KCNMB4Q86W47 210 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 NSL1Q96IY1 281 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 OXCT2Q9BYC2 517 aaPredicted RBP16.07■□□□□ 0.16
LRFN1-201ENST00000248668 SHCBP1LQ9BZQ2 653 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 EBF2Q9HAK2 575 aa16.07■□□□□ 0.16
LRFN1-201ENST00000248668 ANKRD33BA6NCL7 494 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 GLRA3O75311 464 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 SMNDC1O75940 238 aaKnown RBP eCLIP16.06■□□□□ 0.16
LRFN1-201ENST00000248668 FAM163BP0C2L3 166 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 CBLBQ13191 982 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 PCLAFQ15004 111 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 PCSK7Q16549 785 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 SPANXN3Q5MJ09 141 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 VWA5B1Q5TIE3 1220 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 SCD5Q86SK9 330 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 RTN4RL1Q86UN2 441 aaPredicted RBP16.06■□□□□ 0.16
LRFN1-201ENST00000248668 ZNF354CQ86Y25 554 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 TRIM42Q8IWZ5 723 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 INPP5DQ92835 1189 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 C7orf26Q96N11 449 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 SLC39A8Q9C0K1 460 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 DENND2DQ9H6A0 471 aaPredicted RBP16.06■□□□□ 0.16
LRFN1-201ENST00000248668 CASS4Q9NQ75 786 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 PNPOQ9NVS9 261 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 SLC39A10Q9ULF5 831 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 TMEM88BA6NKF7 163 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 KLF11O14901 512 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 TBX18O95935 607 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 HMBSP08397 361 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 FGF3P11487 239 aaPredicted RBP16.06■□□□□ 0.16
LRFN1-201ENST00000248668 RAB27AP51159 221 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 AIF1P55008 147 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 SESN3P58005 492 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 KCTD11Q693B1 232 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 ITPRIPL1Q6GPH6 555 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 DCLRE1AQ6PJP8 1040 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 TIFABQ6ZNK6 161 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 PKMYT1Q99640 499 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 NAT9Q9BTE0 207 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 UPF3AQ9H1J1 476 aaKnown RBP16.06■□□□□ 0.16
LRFN1-201ENST00000248668 HCSTQ9UBK5 93 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 NCAM2O15394 837 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 DNAJC6O75061 913 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 MYCP01106 439 aaPredicted RBP16.06■□□□□ 0.16
LRFN1-201ENST00000248668 PRKCGP05129 697 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 ARRB2P32121 409 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 SLC1A6P48664 564 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 TUBP50607 506 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 MBLAC2Q68D91 279 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 CCNJLQ8IV13 435 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 MCUR1Q96AQ8 359 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 PTCD3Q96EY7 689 aaKnown RBP16.06■□□□□ 0.16
LRFN1-201ENST00000248668 PPP1R36Q96LQ0 422 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 FICDQ9BVA6 458 aa16.06■□□□□ 0.16
LRFN1-201ENST00000248668 TTC24A2A3L6 582 aaPredicted RBP16.05■□□□□ 0.16
LRFN1-201ENST00000248668 M0QZQ0 153 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 PHGDHO43175 533 aaKnown RBP16.05■□□□□ 0.16
LRFN1-201ENST00000248668 CNTFP26441 200 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 CHRNA4P43681 627 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 GLRBP48167 497 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 HCAR3P49019 387 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 TEDDM1Q5T9Z0 273 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 RAPH1Q70E73 1250 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 SPATA6LQ8N4H0 392 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 ATAD1Q8NBU5 361 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 NUDCD1Q96RS6 583 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 CPNE1Q99829 537 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 RRN3Q9NYV6 651 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 PBX3P40426 434 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 MPP3Q13368 585 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 ZNF460Q14592 562 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 GLB1LQ6UWU2 654 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 KYAT3Q6YP21 454 aaKnown RBP16.05■□□□□ 0.16
LRFN1-201ENST00000248668 ARHGAP12Q8IWW6 846 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 SUSD3Q96L08 255 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 RBBP8Q99708 897 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 SAR1AQ9NR31 198 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 MKS1Q9NXB0 559 aa16.05■□□□□ 0.16
LRFN1-201ENST00000248668 A0A096LPK6 155 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 MEI4A8MW99 385 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 SNNO75324 88 aaPredicted RBP16.04■□□□□ 0.16
LRFN1-201ENST00000248668 CYP11A1P05108 521 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 CCR1P32246 355 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 RPS6KA3P51812 740 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 USP46P62068 366 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 SEPT6Q14141 434 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 CLLU1OSQ5K130 101 aa16.04■□□□□ 0.16
LRFN1-201ENST00000248668 TMEM135Q86UB9 458 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms