RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 SPTLC1O15269 473 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 SERPINB7O75635 380 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 CAPN1P07384 714 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 CDH5P33151 784 aaPredicted RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 CD151P48509 253 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 SLC7A5Q01650 507 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 C1QBPQ07021 282 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 CSHL1Q14406 222 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 TRIQKQ629K1 86 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 HSDL2Q6YN16 418 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 C11orf74Q86VG3 221 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 HIST1H2AAQ96QV6 131 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 RAB11FIP5Q9BXF6 653 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 FAM153AQ9UHL3 310 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ZNHIT2Q9UHR6 403 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 FAUP35544 74 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 HSD17B3P37058 310 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 POLE2P56282 527 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 VBP1P61758 197 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 FOXO4P98177 505 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 TRAF7Q6Q0C0 670 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 C11orf84Q9BUA3 381 aaPredicted RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 TMEM134Q9H6X4 195 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 TPRKBQ9Y3C4 175 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 RHPN2P1A8MT19 583 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 TNFRSF10BO14763 440 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 AKAP8O43823 692 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 SLC28A2O43868 658 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 VEGFDO43915 354 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 CCDC166P0CW27 439 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 NOS2P35228 1153 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 SLC7A2P52569 658 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 MPP3Q13368 585 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 GALNTL6Q49A17 601 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 FBXO16Q8IX29 292 aaPredicted RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 PJA1Q8NG27 643 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 PER2O15055 1255 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 PKN1Q16512 942 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ANXA8L1Q5VT79 327 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 FBXO39Q8N4B4 442 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 SMYD1Q8NB12 490 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 TARS2Q9BW92 718 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 RBM22Q9NW64 420 aaKnown RBP eCLIP7.54□□□□□ -1.2
MED28-201ENST00000237380 SNX7Q9UNH6 387 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ZBTB12Q9Y330 459 aaPredicted RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 CXCL14O95715 111 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 PRNPP04156 253 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 NMT1P30419 496 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 HSD17B2P37059 387 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 SP2Q02086 613 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 DDX39BQ13838 428 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 NR6A1Q15406 480 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 SMU1Q2TAY7 513 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 SLC44A5Q8NCS7 719 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 RASSF5Q8WWW0 418 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 AP3S1Q92572 193 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ACDQ96AP0 544 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 TEFMQ96QE5 360 aaKnown RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 MLPHQ9BV36 600 aaPredicted RBP7.54□□□□□ -1.2
MED28-201ENST00000237380 SDHAF3Q9NRP4 125 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 KLK14Q9P0G3 267 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 ST3GAL5Q9UNP4 418 aa7.54□□□□□ -1.2
MED28-201ENST00000237380 MSH4O15457 936 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 KERAO60938 352 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 OR6B1O95007 311 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 MFN2O95140 757 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 HDCP19113 662 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CLCN6P51797 869 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CRYBB1P53674 252 aaPredicted RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 BTKQ06187 659 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 AP5B1Q2VPB7 878 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 NBPF12Q5TAG4 269 aaPredicted RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 FBXO38Q6PIJ6 1188 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 UBE2R2Q712K3 238 aaPredicted RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 BATF3Q9NR55 127 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 MARCH2Q9P0N8 246 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 NRXN1Q9ULB1 1477 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 SLC9A8Q9Y2E8 581 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 PPP1R3GB7ZBB8 358 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 SLC20A2Q08357 652 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 SF3A3Q12874 501 aaKnown RBP eCLIP7.53□□□□□ -1.2
MED28-201ENST00000237380 KPNB1Q14974 876 aaKnown RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 PDZK1Q5T2W1 519 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 GATAD2AQ86YP4 633 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 C1orf54Q8WWF1 131 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 PNPLA2Q96AD5 504 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 SLC22A18Q96BI1 424 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ANKRD27Q96NW4 1050 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 MTMR9Q96QG7 549 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ZYG11BQ9C0D3 744 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CASTOR2A6NHX0 329 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 MYL12BO14950 172 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 VTNP04004 478 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 MLH1P40692 756 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CBWD6Q4V339 395 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ARMC3Q5W041 872 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ZFP1Q6P2D0 407 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CYP4X1Q8N118 509 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 LRMDAQ9H2I8 198 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms