RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 NOGQ13253 232 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 MPP3Q13368 585 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 AFMIDQ63HM1 303 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 RINLQ6ZS11 566 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 SCD5Q86SK9 330 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 KCNMB4Q86W47 210 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 TREML1Q86YW5 311 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 TMPRSS6Q8IU80 811 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 C10orf107Q8IVU9 208 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 ZNF778Q96MU6 729 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 FNIP2Q9P278 1114 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 PPARGC1AQ9UBK2 798 aaKnown RBP16.48■□□□□ 0.23
UBE3D-201ENST00000237186 INPP5FQ9Y2H2 1132 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 KCNU1A8MYU2 1149 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 TMEM189-UBE2V1I3L0A0 370 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 AOC2O75106 756 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 ANXA9O76027 345 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 OAZ2O95190 189 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 EOMESO95936 686 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 TPBGLP0DKB5 382 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 SRGAP2BP0DMP2 458 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 YWHAHQ04917 246 aaPredicted RBP16.48■□□□□ 0.23
UBE3D-201ENST00000237186 TUBB3Q13509 450 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 RWDD4Q6NW29 188 aaKnown RBP16.48■□□□□ 0.23
UBE3D-201ENST00000237186 CMC1Q7Z7K0 106 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 PCSK9Q8NBP7 692 aaKnown RBP16.48■□□□□ 0.23
UBE3D-201ENST00000237186 HASPINQ8TF76 798 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 CASP10Q92851 521 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 C1orf74Q96LT6 269 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 PGLYRP2Q96PD5 576 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 SORT1Q99523 831 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 RGS18Q9NS28 235 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 C20orf96Q9NUD7 363 aaPredicted RBP16.48■□□□□ 0.23
UBE3D-201ENST00000237186 ARMCX1Q9P291 453 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 NKX1-2Q9UD57 310 aaPredicted RBP16.48■□□□□ 0.23
UBE3D-201ENST00000237186 MARCOQ9UEW3 520 aaPredicted RBP16.48■□□□□ 0.23
UBE3D-201ENST00000237186 DNAJC16Q9Y2G8 782 aa16.48■□□□□ 0.23
UBE3D-201ENST00000237186 MYO18AQ92614 2054 aaKnown RBP16.48■□□□□ 0.23
UBE3D-201ENST00000237186 WASH4PA8MWX3 477 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 MAGEC1O60732 1142 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 KITP10721 976 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 RALBP11234 206 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 MYL4P12829 197 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 CPA3P15088 417 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 DNAJB1P25685 340 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 GRIK1P39086 918 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 RAP1GDS1P52306 607 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 PRKCZQ05513 592 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 DSC1Q08554 894 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 PCID2Q5JVF3 399 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 ARMC3Q5W041 872 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 PDPK2PQ6A1A2 396 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 OTOP3Q7RTS5 596 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 LCA5Q86VQ0 697 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 ATPAF2Q8N5M1 289 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 TEX9Q8N6V9 391 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 PTCD2Q8WV60 388 aaKnown RBP16.47■□□□□ 0.23
UBE3D-201ENST00000237186 FCRL2Q96LA5 508 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-201ENST00000237186 NUDCD1Q96RS6 583 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 SIK2Q9H0K1 926 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 DCLRE1BQ9H816 532 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 GLOD4Q9HC38 313 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.47■□□□□ 0.23
UBE3D-201ENST00000237186 TAGLN3Q9UI15 199 aa16.47■□□□□ 0.23
UBE3D-201ENST00000237186 A0A096LPK6 155 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 CABYRO75952 493 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 AOC1P19801 751 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 YY1P25490 414 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 NMBRP28336 390 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 MLLT6P55198 1093 aaPredicted RBP16.46■□□□□ 0.23
UBE3D-201ENST00000237186 PKN3Q6P5Z2 889 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 ARHGAP36Q6ZRI8 547 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 CNTN4Q8IWV2 1026 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 PLD6Q8N2A8 252 aaKnown RBP16.46■□□□□ 0.23
UBE3D-201ENST00000237186 URGCPQ8TCY9 931 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 PPP4R1Q8TF05 950 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 NSMCE1Q8WV22 266 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 APOL2Q9BQE5 337 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 EBF4Q9BQW3 602 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 SLC39A8Q9C0K1 460 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 ZCWPW1Q9H0M4 648 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 C1orf21Q9H246 121 aa16.46■□□□□ 0.23
UBE3D-201ENST00000237186 G3V2L1 256 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 DFFAO00273 331 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 ZNF195O14628 629 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 DIAPH2O60879 1101 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 LYPLA1O75608 230 aaPredicted RBP16.46■□□□□ 0.22
UBE3D-201ENST00000237186 C2P06681 752 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 TPH1P17752 444 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 CCND3P30281 292 aaPredicted RBP16.46■□□□□ 0.22
UBE3D-201ENST00000237186 ADRA1AP35348 466 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 MAP2K2P36507 400 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 POLD2P49005 469 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 PGFP49763 221 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 ABCE1P61221 599 aaKnown RBP16.46■□□□□ 0.22
UBE3D-201ENST00000237186 FAM189BP81408 668 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 ITGA7Q13683 1181 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 RABGAP1LQ5R372 815 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 DENND5AQ6IQ26 1287 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 TIGD7Q6NT04 549 aaPredicted RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms