RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ARHGEF2Q92974 986 aaKnown RBP18.99■□□□□ 0.63
SNX17-201ENST00000233575 TMA16Q96EY4 203 aaKnown RBP18.99■□□□□ 0.63
SNX17-201ENST00000233575 CDCA3Q99618 268 aaPredicted RBP18.99■□□□□ 0.63
SNX17-201ENST00000233575 WDR83Q9BRX9 315 aaKnown RBP18.99■□□□□ 0.63
SNX17-201ENST00000233575 SAYSD1Q9NPB0 183 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 IGSF9Q9P2J2 1179 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 ACTL7AQ9Y615 435 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 ZNF197O14709 1029 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 PAPLNO95428 1278 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 GNA12Q03113 381 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 OLIG2Q13516 323 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 PARP6Q2NL67 630 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 CFAP58Q5T655 872 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 TPGS1Q6ZTW0 290 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 ZNF534Q76KX8 674 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 MTERF4Q7Z6M4 381 aaKnown RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 ARID3BQ8IVW6 561 aaPredicted RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 TDRD5Q8NAT2 981 aaKnown RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 WFDC5Q8TCV5 224 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 PABPC5Q96DU9 382 aaKnown RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 SERPINB12Q96P63 405 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 IL12RB2Q99665 862 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 PABPC3Q9H361 631 aaKnown RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 ZNF576Q9H609 170 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 NSUN3Q9H649 340 aaKnown RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 SP110Q9HB58 689 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 LRRC4CQ9HCJ2 640 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 PLK2Q9NYY3 685 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 RSPH14Q9UHP6 348 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 PLAAQ9Y263 795 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 TTLL3Q9Y4R7 772 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 PRRC2BQ5JSZ5 2229 aaKnown RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 GOLGA6BA6NDN3 693 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 E7EVH7 732 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 HLA-DQB2P05538 268 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 GLDCP23378 1020 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 FDFT1P37268 417 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 YBEYP58557 167 aaPredicted RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 SLC10A7Q0GE19 358 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 PDIA2Q13087 525 aaKnown RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 ZNF177Q13360 481 aaPredicted RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 KYNUQ16719 465 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 TIGD7Q6NT04 549 aaPredicted RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 LRRC49Q8IUZ0 686 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 AGGF1Q8N302 714 aaeCLIP18.98■□□□□ 0.63
SNX17-201ENST00000233575 CARNMT1Q8N4J0 409 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 HJURPQ8NCD3 748 aaPredicted RBP18.98■□□□□ 0.63
SNX17-201ENST00000233575 MAML1Q92585 1016 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 EXOC4Q96A65 974 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 VAT1Q99536 393 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 GBA3Q9H227 469 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 NINJ2Q9NZG7 142 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 TRHDEQ9UKU6 1024 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 TBC1D30Q9Y2I9 924 aa18.98■□□□□ 0.63
SNX17-201ENST00000233575 MYOFQ9NZM1 2061 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 NDC80O14777 642 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 RIPK2O43353 540 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 ACSL3O95573 720 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 RHOCP08134 193 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 HOXD9P28356 352 aaPredicted RBP18.97■□□□□ 0.63
SNX17-201ENST00000233575 MAGEA4P43358 317 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 SPARCL1Q14515 664 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 SLC29A2Q14542 456 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 C6orf118Q5T5N4 469 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 CAND1Q86VP6 1230 aaKnown RBP18.97■□□□□ 0.63
SNX17-201ENST00000233575 ZBED8Q8IZ13 594 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 MLPHQ9BV36 600 aaPredicted RBP18.97■□□□□ 0.63
SNX17-201ENST00000233575 FOXP3Q9BZS1 431 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 RBM22Q9NW64 420 aaKnown RBP eCLIP18.97■□□□□ 0.63
SNX17-201ENST00000233575 UBP1Q9NZI7 540 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 CLEC4EQ9ULY5 219 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 NFS1Q9Y697 457 aa18.97■□□□□ 0.63
SNX17-201ENST00000233575 SHBGP04278 402 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 TPSB2P20231 275 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 ARL4CP56559 192 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 TPSAB1Q15661 275 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 ZNF77Q15935 545 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 TTC39BQ5VTQ0 682 aaPredicted RBP18.96■□□□□ 0.63
SNX17-201ENST00000233575 IL31Q6EBC2 164 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 SYCE2Q6PIF2 218 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 CENPUQ71F23 418 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 ANKMY2Q8IV38 441 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 CPXM2Q8N436 756 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 ST13P5Q8NFI4 369 aaPredicted RBP18.96■□□□□ 0.63
SNX17-201ENST00000233575 DDI1Q8WTU0 396 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 PPP2R3CQ969Q6 453 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 LRRC3BQ96PB8 259 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 SPON2Q9BUD6 331 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 TSPYL1Q9H0U9 437 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 PIH1D1Q9NWS0 290 aaKnown RBP18.96■□□□□ 0.63
SNX17-201ENST00000233575 ZNF510Q9Y2H8 683 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 UNC80Q8N2C7 3258 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 E2F8A0AVK6 867 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 H0Y626 953 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 LUC7L3O95232 432 aaKnown RBP18.96■□□□□ 0.63
SNX17-201ENST00000233575 IL10RBQ08334 325 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 BBS9Q3SYG4 887 aa18.96■□□□□ 0.63
SNX17-201ENST00000233575 RNF219Q5W0B1 726 aaPredicted RBP18.96■□□□□ 0.63
SNX17-201ENST00000233575 RELL1Q8IUW5 271 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms