RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ACKR2O00590 384 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 RGS14O43566 566 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 HPGDP15428 266 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 GRIA4P48058 902 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 TSNQ15631 228 aaKnown RBP13.58□□□□□ -0.24
NEK4-201ENST00000233027 ZNF605Q86T29 641 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 PSTKQ8IV42 348 aaKnown RBP13.58□□□□□ -0.24
NEK4-201ENST00000233027 SLCO1B3Q9NPD5 702 aa13.58□□□□□ -0.24
NEK4-201ENST00000233027 ATXN2Q99700 1313 aaKnown RBP13.58□□□□□ -0.24
NEK4-201ENST00000233027 A0A087WXM4 84 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 MOXD2PA6NHM9 499 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 SIGLEC16A6NMB1 481 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 VPS4BO75351 444 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 LYPLA1O75608 230 aaPredicted RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 ATP5BP06576 529 aaKnown RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 ZNF7P17097 686 aaPredicted RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 GLRA2P23416 452 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 PIK3R1P27986 724 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 ZC3H12AQ5D1E8 599 aaKnown RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 KHDRBS2Q5VWX1 349 aaKnown RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 UNC5AQ6ZN44 842 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 PARP8Q8N3A8 854 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 LRRC39Q96DD0 335 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 FAM192AQ9GZU8 254 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 UBXN8O00124 270 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 VCLP18206 1134 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 NOS3P29474 1203 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 FMO1Q01740 532 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 UTS2BQ765I0 119 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 MTSS1LQ765P7 747 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 YTHDF3Q7Z739 585 aaKnown RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 SETD9Q8NE22 299 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 ACTRT2Q8TDY3 377 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 COG5Q9UP83 839 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 DIP2CQ9Y2E4 1556 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 LOC100506127A0A0U1RQW1 187 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 A0A1W2PPM1 405 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 EIF2S1P05198 315 aaKnown RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 URODP06132 367 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 TYMPP19971 482 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 GRK4P32298 578 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 TNFSF9P41273 254 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 MMP13P45452 471 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 ZSWIM7Q19AV6 140 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 DUPD1Q68J44 220 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 GATAD2AQ86YP4 633 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 BPIFB6Q8NFQ5 453 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 OMA1Q96E52 524 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 PRRG3Q9BZD7 231 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 BTRCQ9Y297 605 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 ZMYM2Q9UBW7 1377 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 MYL12BO14950 172 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 CCDC166P0CW27 439 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 ZNF37AP17032 561 aaPredicted RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 PPP2R1BP30154 601 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 SERPINH1P50454 418 aaKnown RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 NAGLUP54802 743 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 LSM3P62310 102 aaKnown RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 DEFB128Q7Z7B8 93 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 SYT12Q8IV01 421 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 KBTBD2Q8IY47 623 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 C8orf59Q8N0T1 100 aaPredicted RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 DNAJB14Q8TBM8 379 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 ENKURQ8TC29 256 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 SPON1Q9HCB6 807 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 KCNMB3Q9NPA1 279 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 ZMYND8Q9ULU4 1186 aaPredicted RBP13.57□□□□□ -0.24
NEK4-201ENST00000233027 A8MUI8 341 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 PEX11AO75192 247 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 FYNP06241 537 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 NFICP08651 508 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 BST1Q10588 318 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 DDI2Q5TDH0 399 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 TLK2Q86UE8 772 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 ASB7Q9H672 318 aa13.57□□□□□ -0.24
NEK4-201ENST00000233027 PCDH8O95206 1070 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 CLTBP09497 229 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 S100A3P33764 101 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 CD86P42081 329 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 KPNA1P52294 538 aaPredicted RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 TGFB2P61812 414 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 BFSP2Q13515 415 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 FAM171A1Q5VUB5 890 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 ZPBP2Q6X784 338 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 DET1Q7L5Y6 550 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 ZBTB46Q86UZ6 589 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 CACTIN-AS1Q8N1I8 211 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 TMEM159Q96B96 161 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 SERPINB11Q96P15 392 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 LRMDAQ9H2I8 198 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 ASTN2O75129 1339 aaPredicted RBP13.56□□□□□ -0.24
NEK4-201ENST00000233027 A0A0A0MRY4 1105 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 EFCAB10A6NFE3 127 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 PDK4Q16654 411 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 NIPA1Q7RTP0 329 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 MREGQ8N565 214 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 KCTD4Q8WVF5 259 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 DNAJC19Q96DA6 116 aa13.56□□□□□ -0.24
NEK4-201ENST00000233027 SPATA13Q96N96 652 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms