RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CDC25CP30307 473 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 CCL14Q16627 93 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 ZCCHC23Q6ZST2 131 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 REM2Q8IYK8 340 aaPredicted RBP18.74■□□□□ 0.59
CLIP2-201ENST00000223398 BSNDQ8WZ55 320 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 CLIP3Q96DZ5 547 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 ARSHQ5FYA8 562 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 MTDHQ86UE4 582 aaKnown RBP18.74■□□□□ 0.59
CLIP2-201ENST00000223398 GPSM1Q86YR5 675 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 CYP4X1Q8N118 509 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 LRRC52Q8N7C0 313 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 SEMA4BQ9NPR2 832 aaPredicted RBP18.74■□□□□ 0.59
CLIP2-201ENST00000223398 SCN3BQ9NY72 215 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 INPP4BO15327 924 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 ZNF862O60290 1169 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 SKIV2L2P42285 1042 aaKnown RBP18.74■□□□□ 0.59
CLIP2-201ENST00000223398 LRRC23Q53EV4 343 aaPredicted RBP18.74■□□□□ 0.59
CLIP2-201ENST00000223398 TCP10LQ8TDR4 215 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 HDAC7Q8WUI4 952 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 NRDE2Q9H7Z3 1164 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 OPTCQ9UBM4 332 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 BLOC1S6Q9UL45 172 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 A0A0A0MRY4 1105 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 XPO1O14980 1071 aaKnown RBP18.74■□□□□ 0.59
CLIP2-201ENST00000223398 HNRNPRO43390 633 aaKnown RBP18.74■□□□□ 0.59
CLIP2-201ENST00000223398 FMO1Q01740 532 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 COL9A3Q14050 684 aaPredicted RBP18.74■□□□□ 0.59
CLIP2-201ENST00000223398 TOMM20Q15388 145 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 CYP2A13Q16696 494 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 ADCK1Q86TW2 530 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 RNF168Q8IYW5 571 aaPredicted RBP18.74■□□□□ 0.59
CLIP2-201ENST00000223398 OR56A4Q8NGH8 313 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 SPATA13Q96N96 652 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 LGMNQ99538 433 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 PRDM12Q9H4Q4 367 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 MRC1P22897 1456 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 KLRG2A4D1S0 409 aaPredicted RBP18.73■□□□□ 0.59
CLIP2-201ENST00000223398 MEI4A8MW99 385 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TOMM70O94826 608 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 ZNF135P52742 658 aaPredicted RBP18.73■□□□□ 0.59
CLIP2-201ENST00000223398 EML3Q32P44 896 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 LRRC8BQ6P9F7 803 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 CYP20A1Q6UW02 462 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 SCLYQ96I15 445 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.73■□□□□ 0.59
CLIP2-201ENST00000223398 ADAM28Q9UKQ2 775 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 NFKBIEO00221 500 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 IL2P60568 153 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 MIIPQ5JXC2 388 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 KLHL5Q96PQ7 755 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 HGH1Q9BTY7 390 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 KRT84Q9NSB2 600 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 FCRL2Q96LA5 508 aaPredicted RBP18.73■□□□□ 0.59
CLIP2-201ENST00000223398 SNX13Q9Y5W8 968 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TBC1D3DA0A087WVF3 549 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TBC1D3IA0A087WXS9 549 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TBC1D3EA0A087X179 549 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TBC1D3KA0A087X1G2 549 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TBC1D3FA6NER0 549 aaPredicted RBP18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TBC1D3LB9A6J9 549 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TGFB1I1O43294 461 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 PARNO95453 639 aaKnown RBP18.73■□□□□ 0.59
CLIP2-201ENST00000223398 ADH1CP00326 375 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TBC1D3HP0C7X1 549 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 HNF4AP41235 474 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 CLCNKBP51801 687 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 PPIGQ13427 754 aaKnown RBP eCLIP18.73■□□□□ 0.592e-7■■■□□ 14.8
CLIP2-201ENST00000223398 TBC1D3GQ6DHY5 549 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TBC1D3CQ6IPX1 549 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 BNC2Q6ZN30 1099 aaPredicted RBP18.73■□□□□ 0.59
CLIP2-201ENST00000223398 TBC1D3Q8IZP1 549 aaPredicted RBP18.73■□□□□ 0.59
CLIP2-201ENST00000223398 ALG9Q9H6U8 611 aa18.73■□□□□ 0.59
CLIP2-201ENST00000223398 KRCC1Q9NPI7 259 aaPredicted RBP18.73■□□□□ 0.59
CLIP2-201ENST00000223398 A0A0G2JLL6 359 aaPredicted RBP18.72■□□□□ 0.59
CLIP2-201ENST00000223398 ATP4AP20648 1035 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 GTF2E2P29084 291 aaKnown RBP18.72■□□□□ 0.59
CLIP2-201ENST00000223398 PKN2Q16513 984 aaKnown RBP18.72■□□□□ 0.59
CLIP2-201ENST00000223398 KDM7AQ6ZMT4 941 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 PRRT2Q7Z6L0 340 aaPredicted RBP18.72■□□□□ 0.59
CLIP2-201ENST00000223398 COL26A1Q96A83 441 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 GMIPQ9P107 970 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 ERCC2P18074 760 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 DGKAP23743 735 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 PLEKHM3Q6ZWE6 761 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 SLC41A1Q8IVJ1 513 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 FAM126AQ9BYI3 521 aaPredicted RBP18.72■□□□□ 0.59
CLIP2-201ENST00000223398 RICTORQ6R327 1708 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.72■□□□□ 0.59
CLIP2-201ENST00000223398 CATP04040 527 aaKnown RBP18.72■□□□□ 0.59
CLIP2-201ENST00000223398 PCID2Q5JVF3 399 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 WDR93Q6P2C0 686 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 C16orf46Q6P387 395 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 PPP2R1BP30154 601 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 RIPOR1Q6ZS17 1223 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 CYP4Z1Q86W10 505 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 RNF157Q96PX1 679 aa18.72■□□□□ 0.59
CLIP2-201ENST00000223398 AGO1Q9UL18 857 aaKnown RBP18.72■□□□□ 0.59
CLIP2-201ENST00000223398 A0A0B4J269 797 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 ANKDD1BA6NHY2 528 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 SLCO1B7G3V0H7 640 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms