RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 FAM110CQ1W6H9 321 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 SH2D4BQ5SQS7 431 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 RAB44Q7Z6P3 723 aaPredicted RBP15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 SLC41A1Q8IVJ1 513 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 KBTBD7Q8WVZ9 684 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 OMDQ99983 421 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 WDR55Q9H6Y2 383 aaPredicted RBP15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 COG4Q9H9E3 785 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 PIRO00625 290 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 GPR182O15218 404 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 EPHA3P29320 983 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 RGS2P41220 211 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 TUBP50607 506 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 CACNA2D1P54289 1103 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 IRGCQ6NXR0 463 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 C16orf89Q6UX73 402 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 MIB1Q86YT6 1006 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 SPATA22Q8NHS9 363 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 MZB1Q8WU39 189 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 USP13Q92995 863 aaPredicted RBP15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 FAM136AQ96C01 138 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 ADAM28Q9UKQ2 775 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 SCNN1AP37088 669 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 RBBP8Q99708 897 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 RHOBTB2Q9BYZ6 727 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 ADAMTS10Q9H324 1103 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 NT5MQ9NPB1 228 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 CDH9Q9ULB4 789 aa15.23■□□□□ 0.03
UBE2D4-201ENST00000222402 ALDOAP04075 364 aaKnown RBP15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 WARSP23381 471 aaKnown RBP15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 GLUD2P49448 558 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 PLK1P53350 603 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 SLC12A1Q13621 1099 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 LAYNQ6UX15 382 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 TMEM40Q8WWA1 233 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 MARK4Q96L34 752 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 TBL1YQ9BQ87 522 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 SPON2Q9BUD6 331 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 GDAP2Q9NXN4 497 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 IGSF9Q9P2J2 1179 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 UBA6A0AVT1 1052 aaPredicted RBP15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 TRAFD1O14545 582 aaPredicted RBP15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 MAGEC1O60732 1142 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 PGK1P00558 417 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 GM2AP17900 193 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 GRIA4P48058 902 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 LIMK2P53671 638 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 BLMHQ13867 455 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 CYLC2Q14093 348 aaPredicted RBP15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 CNGA3Q16281 694 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 FAM83EQ2M2I3 478 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 RALGPS1Q5JS13 557 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 MARCH8Q5T0T0 291 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 BBS5Q8N3I7 341 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 NPY6RQ99463 290 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 CENPKQ9BS16 269 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 PLA2G4CQ9UP65 541 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 FAM72CH0Y354 149 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 GJA5P36382 358 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 OR1G1P47890 313 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 PRKAA1Q13131 559 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 INSCQ1MX18 579 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 RARS2Q5T160 578 aaKnown RBP15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 FAM72AQ5TYM5 149 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 FAM72DQ6L9T8 149 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 FAM72BQ86X60 149 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 ZNF781Q8N8C0 355 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 PTCD3Q96EY7 689 aaKnown RBP15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 DDX50Q9BQ39 737 aaKnown RBP15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 EIF2B3Q9NR50 452 aaKnown RBP15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 KANSL3Q9P2N6 904 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 SLC7A8Q9UHI5 535 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 SFMBT1Q9UHJ3 866 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 TRPV2Q9Y5S1 764 aa15.22■□□□□ 0.03
UBE2D4-201ENST00000222402 TK2O00142 265 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 H2AFYO75367 372 aaKnown RBP15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 COX4I1P13073 169 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 CD151P48509 253 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 MAPRE1Q15691 268 aaKnown RBP15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 TEDDM1Q5T9Z0 273 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 MFSD14CQ5VZR4 134 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 CYP4V2Q6ZWL3 525 aaPredicted RBP15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 PTAR1Q7Z6K3 402 aaPredicted RBP15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 CXorf38Q8TB03 319 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 PHF21BQ96EK2 531 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 UBE2OQ9C0C9 1292 aaKnown RBP15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 KCNK13Q9HB14 408 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 MOCS1Q9NZB8 636 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 FAM95CA0A1B0GW59 222 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 MT-CYBP00156 380 aaPredicted RBP15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 MYL4P12829 197 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 MPSTP25325 297 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 MRPS6P82932 125 aaKnown RBP15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 ZNF235Q14590 738 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 GRM3Q14832 879 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 GALNT4Q8N4A0 578 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 SH3TC2Q8TF17 1288 aa15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 KHSRPQ92945 711 aaKnown RBP eCLIP15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 MRPL1Q9BYD6 325 aaKnown RBP15.21■□□□□ 0.03
UBE2D4-201ENST00000222402 MTMR10Q9NXD2 777 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms