RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 MFN2O95140 757 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 CYP3A4P08684 503 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 VDRP11473 427 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 PIK3R1P27986 724 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 PSME3P61289 254 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 DMC1Q14565 340 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 ZACNQ401N2 412 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 SAMD4BQ5PRF9 694 aaKnown RBP11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 TDRD10Q5VZ19 366 aaKnown RBP11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 TAF2Q6P1X5 1199 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 CCDC80Q76M96 950 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 CAMK1DQ8IU85 385 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 ENDOVQ8N8Q3 282 aaKnown RBP11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 GLIS1Q8NBF1 620 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 MAGEE2Q8TD90 523 aaPredicted RBP11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 HTR3CQ8WXA8 447 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 ERLEC1Q96DZ1 483 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 C12orf42Q96LP6 360 aa11.74□□□□□ -0.53
DNMT3B-201ENST00000201963 MAGEB2O15479 319 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 TGFB3P10600 412 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 NAMPTP43490 491 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 AGAP9Q5VTM2 703 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 P3H2Q8IVL5 708 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 NKD2Q969F2 451 aaPredicted RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 EBNA1BP2Q99848 306 aaKnown RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 PNPLA3Q9NST1 481 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 RBMX2Q9Y388 322 aaKnown RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 PCDHA2Q9Y5H9 948 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 A6NHS1 94 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 M0QYT0 321 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 BIRC5O15392 142 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 JCHAINP01591 159 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 TSHRP16473 764 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 POU5F1Q01860 360 aaKnown RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 TMEM176AQ96HP8 235 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 FAR2Q96K12 515 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 BTBD9Q96Q07 612 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 EGFL8Q99944 293 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 ITGA11Q9UKX5 1188 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 A0A087WZ62 844 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 RRN3P2A6NIE6 340 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 SEPT4O43236 478 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 LDLRP01130 860 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 PSMB9P28065 219 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 LRPAP1P30533 357 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 ZIK1Q3SY52 487 aaPredicted RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 NADK2Q4G0N4 442 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 SH3D19Q5HYK7 790 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 MFSD4BQ5TF39 518 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 ADCY4Q8NFM4 1077 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 RDM1Q8NG50 284 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 OR5B17Q8NGF7 314 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 JOSD2Q8TAC2 188 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 FAM162AQ96A26 154 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 LENG8Q96PV6 779 aaPredicted RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 FDXACB1Q9BRP7 624 aaPredicted RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 CLK4Q9HAZ1 481 aaKnown RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 TRNAU1APQ9NX07 287 aaKnown RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 HACD3Q9P035 362 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 MYH2Q9UKX2 1941 aa11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 TNRC6CQ9HCJ0 1690 aaKnown RBP11.73□□□□□ -0.53
DNMT3B-201ENST00000201963 SIGLEC16A6NMB1 481 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 E5RI56 91 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 RNF103O00237 685 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 MTA2O94776 668 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 OR6B1O95007 311 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 GABRB2P47870 512 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 TUBP50607 506 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 UBE3AQ05086 875 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 CACNB2Q08289 660 aaPredicted RBP11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 ITGA7Q13683 1181 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 TMEM63BQ5T3F8 832 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 CHSY1Q86X52 802 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 WDR49Q8IV35 697 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 TNIP3Q96KP6 325 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 RNF145Q96MT1 663 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 C17orf80Q9BSJ5 609 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 UBE2OQ9C0C9 1292 aaKnown RBP11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 COG4Q9H9E3 785 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 VTI1BQ9UEU0 232 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 PRPF19Q9UMS4 504 aaKnown RBP11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 SUPT3HB4E1H0 165 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 PSMD12O00232 456 aaPredicted RBP11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 PGAM1P18669 254 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 MMP8P22894 467 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 TTKP33981 857 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 GRTP1Q5TC63 336 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 SCUBE3Q8IX30 993 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 PABPC5Q96DU9 382 aaKnown RBP11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 C9orf16Q9BUW7 83 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 OSBPL11Q9BXB4 747 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 RGS5O15539 181 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 WDR47O94967 919 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 GJB1P08034 283 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 CCDC166P0CW27 439 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 DNAJB2P25686 324 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 OR1G1P47890 313 aa11.72□□□□□ -0.53
DNMT3B-201ENST00000201963 MTX3Q5HYI7 312 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms