RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 SAMD4BQ5PRF9 694 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 DDHD1Q8NEL9 900 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 OR10Q1Q8NGQ4 319 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GPR108Q9NPR9 543 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 PHPT1Q9NRX4 125 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 AP4E1Q9UPM8 1137 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 UTYO14607 1347 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 MDFIC2A0A1B0GVS7 189 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TRIM43BA6NCK2 446 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GLSO94925 669 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 USP17L7P0C7H9 530 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SULT2A1Q06520 285 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 PGBD2Q6P3X8 592 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ILDR1Q86SU0 546 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 SAMD3Q8N6K7 520 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TDRD5Q8NAT2 981 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 MTMR9Q96QG7 549 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SLC29A3Q9BZD2 475 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 DUOX2Q9NRD8 1548 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 BORCS7-ASMTA0A0B4J1R7 106 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FAM187AA6NFU0 413 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SNCGO76070 127 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 MDH1BQ5I0G3 518 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 WASHC2DQ5SRD0 308 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FAM171A1Q5VUB5 890 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 RDM1Q8NG50 284 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 BORCS7Q96B45 105 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 NSMCE3Q96MG7 304 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ACTR8Q9H981 624 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 NFATC1O95644 943 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 IL33O95760 270 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 PDHA1P08559 390 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 RBP1P09455 135 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TYMPP19971 482 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 PFKPQ01813 784 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CASP8Q14790 479 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 KNOP1Q1ED39 458 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 ZNF792Q3KQV3 632 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ARL6IP4Q66PJ3 421 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 ALG1LQ6GMV1 187 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 LDHDQ86WU2 507 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 STK40Q8N2I9 435 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ANKRD13CQ8N6S4 541 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SLC44A5Q8NCS7 719 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CDY2AQ9Y6F7 541 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CDY1Q9Y6F8 540 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FAM20BO75063 409 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SUPT7LO94864 414 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 IL1R1P14778 569 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SLC7A5Q01650 507 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ST3GAL4Q11206 333 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SYT12Q8IV01 421 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 PROM2Q8N271 834 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FAM172AQ8WUF8 416 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 UROC1Q96N76 676 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GPR101Q96P66 508 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 CORO1BQ9BR76 489 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FAM172BPA6NC97 362 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ZNF726A6NNF4 738 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 SERPINF2P08697 491 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TKTP29401 623 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 NFKB2Q00653 900 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ATP13A5Q4VNC0 1218 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CARD16Q5EG05 197 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FAM91A1Q658Y4 838 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 PTAR1Q7Z6K3 402 aaPredicted RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 DAW1Q8N136 415 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 C7orf57Q8NEG2 295 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 DENND6BQ8NEG7 585 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 EME1Q96AY2 570 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.5□□□□□ -1.85
NEB-201ENST00000172853 CPSF1Q10570 1443 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 ACOT7O00154 380 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 NR3C1P04150 777 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ATP5C1P36542 298 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 MAPK8P45983 427 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CASP4P49662 377 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TBX4P57082 545 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ZSWIM7Q19AV6 140 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ZER1Q7Z7L7 766 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 LIX1LQ8IVB5 337 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ZC3H7AQ8IWR0 971 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 IL22RA1Q8N6P7 574 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 HDAC2Q92769 488 aaKnown RBP3.5□□□□□ -1.85
NEB-201ENST00000172853 FUBP3Q96I24 572 aaKnown RBP eCLIP3.5□□□□□ -1.85
NEB-201ENST00000172853 CASD1Q96PB1 797 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 AIFM2Q9BRQ8 373 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 FICDQ9BVA6 458 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 GREM2Q9H772 168 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CD209Q9NNX6 404 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 CORO2BQ9UQ03 480 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 HEBP2Q9Y5Z4 205 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 DPPA5A6NC42 116 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 OR5H15A6NDH6 313 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 OR5H14A6NHG9 310 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 TMEM88BA6NKF7 163 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 OR5H1A6NKK0 313 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 ENO4A6NNW6 628 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 H3BN98 237 aa3.5□□□□□ -1.85
NEB-201ENST00000172853 RGS20O76081 388 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms