RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Lrrc46Q9DAP0 323 aa9.9□□□□□ -0.82
Pcdh1-201ENSMUST00000057185 IqccA2ADZ8 418 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Dennd5bA2RSQ0 1274 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PiggD3Z3Y1 983 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zc3h12bG3X9I7 835 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm6408J3QNG1 320 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 En1P09065 401 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ccdc153P0C7Q1 202 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pou4f1P17208 421 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ckmt1P30275 418 aaKnown RBP9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 B3gat3P58158 335 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gpsm3Q3U1Z5 159 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Akap14Q3V0I7 536 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Lrrc47Q505F5 581 aaKnown RBP9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Afap1l2Q5DTU0 825 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Smpd4Q6ZPR5 823 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 DcstampQ7TNJ0 470 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 LppQ8BFW7 613 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Wdr59Q8C0M0 992 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Tmem154Q8C4Q9 181 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 4933409G03RikQ8C5U0 320 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 AA792892Q8C6S1 278 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pcdha3Q91Y16 942 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Tas1r3Q925D8 858 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Isl2Q9CXV0 359 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cdyl2Q9D5D8 503 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Serpinb9bQ9DAV6 377 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 NumbQ9QZS3 653 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zc3h4Q6ZPZ3 1304 aaKnown RBP9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Axin1O35625 863 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Icam1P13597 537 aaKnown RBP9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 M6prP24668 278 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Map3k7clP58500 142 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Grm1P97772 1199 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sdr16c6Q05A13 316 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ptchd3Q0EEE2 906 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 IqcmQ149I8 489 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 McuQ3UMR5 350 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Akr1clQ3UXL1 322 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Marveld2Q3UZP0 555 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rbm22Q8BHS3 420 aaKnown RBP9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 DseQ8BLI4 958 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Kansl2Q8BQR4 486 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 OsgepQ8BWU5 335 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Strip2Q8C9H6 844 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ccdc63Q8CDV6 558 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rell1Q8K2J7 272 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Myoz3Q8R4E4 245 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 ClyblQ8R4N0 338 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Tnip2Q99JG7 430 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Grm3Q9QYS2 879 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PtsQ9R1Z7 144 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Wnt8bQ9WUD6 350 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm28168A0A087WNP1 180 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mtx3D3YTP3 312 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sec22bO08547 215 aaKnown RBP9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Per3O70361 1113 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Psmc3O88685 442 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 GsnP13020 780 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ap2a2P17427 938 aaKnown RBP9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 LmnaP48678 665 aaKnown RBP9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Morf4l1P60762 362 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Q6GQU0 248 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sez6lQ6P1D5 963 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Podnl1Q6P3Y9 559 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rps27lQ6ZWY3 84 aaKnown RBP9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 MtbpQ8BJS8 894 aaKnown RBP9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Celf3Q8CIN6 465 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Plekha4Q8VC98 588 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pcdhb18Q91Y02 792 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mccc1Q99MR8 717 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Il21rQ9JHX3 529 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Map3k14Q9WUL6 942 aa9.89□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rhbdl2A2AGA4 302 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 ZfaP23607 742 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 SelpQ01102 768 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Coq10bQ3THF9 240 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rbm44Q3V089 1013 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 GpamQ61586 827 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sema3cQ62181 751 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Tbc1d12Q6A039 696 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rxfp1Q6R6I7 758 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Xylt1Q811B1 953 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ankrd52Q8BTI7 1076 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Panx3Q8CEG0 392 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ube2q2Q8K2Z8 378 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Adi1Q99JT9 179 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Trmt11Q9CWH5 460 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pgm3Q9CYR6 542 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ampd2Q9DBT5 798 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PollQ9QXE2 573 aaKnown RBP9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Egfl7Q9QXT5 275 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 QkiQ9QYS9 341 aaKnown RBP9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mapk13Q9Z1B7 366 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 VarsQ9Z1Q9 1263 aaKnown RBP9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 A0A1Y7VP24 259 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm13941A2AJ38 245 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm4871D3Z0W7 314 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm8257E9Q8R3 264 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sema6aO35464 1031 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms