RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 NUP93Q8N1F7 819 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 RNF34Q969K3 372 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 TTPALQ9BTX7 342 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 SLC13A1Q9BZW2 595 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 ABCC13Q9NSE7 274 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 KLHL8Q9P2G9 620 aaPredicted RBP15.44■□□□□ 0.06
TRIM3-215ENST00000639856 NUP205Q92621 2012 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 SHROOM3Q8TF72 1996 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 GREB1Q4ZG55 1949 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 LTBP2Q14767 1821 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 ADAM12O43184 909 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 IRAK2O43187 625 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 ATP6V1G2O95670 118 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 RPL17P18621 184 aaKnown RBP15.44■□□□□ 0.06
TRIM3-215ENST00000639856 PTPN3P26045 913 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 GJA8P48165 433 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 NIPAL4Q0D2K0 466 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 EIF4EBP2Q13542 120 aaPredicted RBP15.44■□□□□ 0.06
TRIM3-215ENST00000639856 ICE2Q659A1 982 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 FBXO46Q6PJ61 603 aaPredicted RBP15.44■□□□□ 0.06
TRIM3-215ENST00000639856 UNC5BQ8IZJ1 945 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 KIF2BQ8N4N8 673 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 NPWQ8N729 165 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 RFWD2Q8NHY2 731 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 CDKL2Q92772 493 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 HDAC11Q96DB2 347 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 SEPT5Q99719 369 aaPredicted RBP15.44■□□□□ 0.06
TRIM3-215ENST00000639856 BRD8Q9H0E9 1235 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 CWH43Q9H720 699 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 PIH1D1Q9NWS0 290 aaKnown RBP15.44■□□□□ 0.06
TRIM3-215ENST00000639856 DCTN4Q9UJW0 460 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 TRIM33Q9UPN9 1127 aa15.44■□□□□ 0.06
TRIM3-215ENST00000639856 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.43■□□□□ 0.06
TRIM3-215ENST00000639856 KRT16P08779 473 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 MAGEA11P43364 429 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 ALDH7A1P49419 539 aaKnown RBP15.43■□□□□ 0.06
TRIM3-215ENST00000639856 ELAVL2Q12926 359 aaKnown RBP15.43■□□□□ 0.06
TRIM3-215ENST00000639856 GPR17Q13304 367 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 CRYMQ14894 314 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 BEND5Q7L4P6 421 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 TRIM42Q8IWZ5 723 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 NDUFAF2Q8N183 169 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 EPAS1Q99814 870 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 SMOC2Q9H3U7 446 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 PRDM5Q9NQX1 630 aaPredicted RBP15.43■□□□□ 0.06
TRIM3-215ENST00000639856 PCMTD2Q9NV79 361 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 SYBUQ9NX95 663 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 GMIPQ9P107 970 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 OR12D3Q9UGF7 316 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 SCML2Q9UQR0 700 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 CDY1Q9Y6F8 540 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 MTSS1O43312 755 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 LRIG2O94898 1065 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 CSF2RAP15509 400 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 MX2P20592 715 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 CRHR1P34998 444 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 DEFB103AP81534 67 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 NAB1Q13506 487 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 MGAT5BQ3V5L5 792 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 FAM43BQ6ZT52 329 aaPredicted RBP15.43■□□□□ 0.06
TRIM3-215ENST00000639856 ARMC2Q8NEN0 867 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 MAGEC3Q8TD91 643 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 ARMC5Q96C12 935 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 TRIM62Q9BVG3 475 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 C11orf49Q9H6J7 331 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 CD248Q9HCU0 757 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 BAIAP2L1Q9UHR4 511 aa15.43■□□□□ 0.06
TRIM3-215ENST00000639856 TRIM43BA6NCK2 446 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 AP2A1O95782 977 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 TARSP26639 723 aaKnown RBP15.42■□□□□ 0.06
TRIM3-215ENST00000639856 EPHB2P29323 1055 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 SERPINB6P35237 376 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 GALNT2Q10471 571 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 DUSP4Q13115 394 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 PACS1Q6VY07 963 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 ANKS3Q6ZW76 656 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 TRIM43Q96BQ3 446 aaPredicted RBP15.42■□□□□ 0.06
TRIM3-215ENST00000639856 GORASP1Q9BQQ3 440 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 SIK2Q9H0K1 926 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 NOD2Q9HC29 1040 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 SIRPGQ9P1W8 387 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 ZFP69BQ9UJL9 534 aa15.42■□□□□ 0.06
TRIM3-215ENST00000639856 MRPL42Q9Y6G3 142 aaKnown RBP15.42■□□□□ 0.06
TRIM3-215ENST00000639856 A0A0G2JND7 137 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 EFEMP2O95967 443 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 POLBP06746 335 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 DLDP09622 509 aaKnown RBP15.41■□□□□ 0.06
TRIM3-215ENST00000639856 T-ENOLP0DO92 83 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 GARSP41250 739 aaKnown RBP15.41■□□□□ 0.06
TRIM3-215ENST00000639856 TAF1BQ53T94 588 aaPredicted RBP15.41■□□□□ 0.06
TRIM3-215ENST00000639856 MTDHQ86UE4 582 aaKnown RBP15.41■□□□□ 0.06
TRIM3-215ENST00000639856 ACMSDQ8TDX5 336 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 IGSF21Q96ID5 467 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 AGAP3Q96P47 875 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 MECRQ9BV79 373 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 LRMDAQ9H2I8 198 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 FBXO44Q9H4M3 255 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 KCNK13Q9HB14 408 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 ARHGEF38Q9NXL2 777 aa15.41■□□□□ 0.06
TRIM3-215ENST00000639856 HAO1Q9UJM8 370 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms