RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 VANGL2Q9ULK5 521 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 PLLPQ9Y342 182 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 RPS6KL1Q9Y6S9 549 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 NYNRINQ9P2P1 1898 aaKnown RBP10.04□□□□□ -0.8
NECAP1-219ENST00000639811 ZCWPW2A0A1B0GU75 182 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 TOP3BO95985 862 aaKnown RBP10.04□□□□□ -0.8
NECAP1-219ENST00000639811 POLBP06746 335 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 CCNB1P14635 433 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 CPB1P15086 417 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 TPH1P17752 444 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 YWHAQP27348 245 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 SERPINB4P48594 390 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 CCL23P55773 120 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 TBX4P57082 545 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 EFEMP1Q12805 493 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 GPR17Q13304 367 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 ARHGEF6Q15052 776 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 SPANXN3Q5MJ09 141 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 RASIP1Q5U651 963 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 TIFABQ6ZNK6 161 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 TMEM135Q86UB9 458 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 ARHGAP18Q8N392 663 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 RTL3Q8N8U3 475 aaKnown RBP10.04□□□□□ -0.8
NECAP1-219ENST00000639811 DNAAF3Q8N9W5 541 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 SPATA22Q8NHS9 363 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 FBXO32Q969P5 355 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 CERS2Q96G23 380 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 C1orf74Q96LT6 269 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 DEFB118Q96PH6 123 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 IL12RB2Q99665 862 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 SEZ6LQ9BYH1 1024 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 NOL6Q9H6R4 1146 aaKnown RBP10.04□□□□□ -0.8
NECAP1-219ENST00000639811 MANSC1Q9H8J5 431 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 PAK6Q9NQU5 681 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-219ENST00000639811 PCMTD2Q9NV79 361 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 KLHL14Q9P2G3 628 aa10.04□□□□□ -0.8
NECAP1-219ENST00000639811 MAGED2Q9UNF1 606 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-219ENST00000639811 WASH4PA8MWX3 477 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 MATN3O15232 486 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 GSTA1P08263 222 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 F7P08709 466 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-219ENST00000639811 HAPLN1P10915 354 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-219ENST00000639811 BGNP21810 368 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 PAPOLAP51003 745 aaKnown RBP10.03□□□□□ -0.8
NECAP1-219ENST00000639811 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-219ENST00000639811 TAF10Q12962 218 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 MGAT5BQ3V5L5 792 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 FBXW10Q5XX13 1052 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 PRSS55Q6UWB4 352 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-219ENST00000639811 PACS2Q86VP3 889 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 RASSF3Q86WH2 238 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 NDUFAF2Q8N183 169 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 LZTR1Q8N653 840 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 C10orf82Q8WW14 230 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 CDKL2Q92772 493 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 ZNF669Q96BR6 464 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-219ENST00000639811 SEPT5Q99719 369 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-219ENST00000639811 PLCD4Q9BRC7 762 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 MECRQ9BV79 373 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 LRRC40Q9H9A6 602 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 PRDM5Q9NQX1 630 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-219ENST00000639811 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.03□□□□□ -0.8
NECAP1-219ENST00000639811 HAUS2Q9NVX0 235 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 BFARQ9NZS9 450 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 FNDC1Q4ZHG4 1894 aaPredicted RBP10.03□□□□□ -0.8
NECAP1-219ENST00000639811 GREB1Q4ZG55 1949 aa10.03□□□□□ -0.8
NECAP1-219ENST00000639811 HGSO14964 777 aaPredicted RBP10.02□□□□□ -0.8
NECAP1-219ENST00000639811 ADAM12O43184 909 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 ATP9BO43861 1147 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 MT-CYBP00156 380 aaPredicted RBP10.02□□□□□ -0.8
NECAP1-219ENST00000639811 CXCL10P02778 98 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 ALDOAP04075 364 aaKnown RBP10.02□□□□□ -0.8
NECAP1-219ENST00000639811 CNTFP26441 200 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 OVGP1Q12889 678 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 DUSP4Q13115 394 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 NAB1Q13506 487 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 PSMD5Q16401 504 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 ANKRD20A4Q4UJ75 823 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 MS4A13Q5J8X5 152 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 CES4AQ5XG92 561 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 MIB1Q86YT6 1006 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.02□□□□□ -0.8
NECAP1-219ENST00000639811 ARMC2Q8NEN0 867 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 SPPL2BQ8TCT7 592 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 MFSD3Q96ES6 412 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 FCRL5Q96RD9 977 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 TMEM175Q9BSA9 504 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 IQCGQ9H095 443 aaKnown RBP10.02□□□□□ -0.8
NECAP1-219ENST00000639811 RXFP1Q9HBX9 757 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 GLOD4Q9HC38 313 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 CHRAC1Q9NRG0 131 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 CLIC5Q9NZA1 410 aa10.02□□□□□ -0.8
NECAP1-219ENST00000639811 TPP1O14773 563 aa10.02□□□□□ -0.81
NECAP1-219ENST00000639811 HOXA2O43364 376 aa10.02□□□□□ -0.81
NECAP1-219ENST00000639811 DNAJC8O75937 253 aaPredicted RBP10.02□□□□□ -0.81
NECAP1-219ENST00000639811 CNTN5O94779 1100 aa10.02□□□□□ -0.81
NECAP1-219ENST00000639811 USP1O94782 785 aa10.02□□□□□ -0.81
NECAP1-219ENST00000639811 RTN3O95197 1032 aaPredicted RBP10.02□□□□□ -0.81
NECAP1-219ENST00000639811 HLA-DQB2P05538 268 aa10.02□□□□□ -0.81
NECAP1-219ENST00000639811 SLC2A3P11169 496 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms