RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 WDR27A2RRH5 827 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 USP17L7P0C7H9 530 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 PABPC1P11940 636 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 NUP107P57740 925 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 FAM220AQ7Z4H9 259 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 CXorf40BQ96DE9 158 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 RNF145Q96MT1 663 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 PDS5AQ29RF7 1337 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 PPP1R3GB7ZBB8 358 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 BHMG1C9JSJ3 638 aaPredicted RBP17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 CTDNEP1O95476 244 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 JAK1P23458 1154 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 CDC25CP30307 473 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 OMPP47874 163 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 GPR15P49685 360 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 TATDN2Q93075 761 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 TM6SF2Q9BZW4 377 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 ADARB2Q9NS39 739 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 PHTF1Q9UMS5 762 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 CDY2AQ9Y6F7 541 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 CDY1Q9Y6F8 540 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 SNCAIPQ9Y6H5 919 aa17.27■□□□□ 0.35
CACNA1A-253ENST00000637927 CES2O00748 559 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 CTPS1P17812 591 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 CDH8P55286 799 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 GLIS2Q9BZE0 524 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 PACSIN3Q9UKS6 424 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 PHF24Q9UPV7 400 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 ABCC3O15438 1527 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 BTN3A1O00481 513 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 PPP1R37O75864 691 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 CD44P16070 742 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 PKN2Q16513 984 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 CCNYL2Q5T2Q4 361 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 PLPP4Q5VZY2 271 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 PRUNE1Q86TP1 453 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 AGGF1Q8N302 714 aaeCLIP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 ZBTB10Q96DT7 871 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 GTPBP2Q9BX10 602 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 OSGEPQ9NPF4 335 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 TRPC5OSA6NMA1 111 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 MICAL2O94851 1124 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 C4BPBP20851 252 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 GRIK4Q16099 956 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 C4orf46Q504U0 113 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 USP38Q8NB14 1042 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 CMTM6Q9NX76 183 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 AAR2Q9Y312 384 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 JCADQ9P266 1359 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 CYP4B1P13584 511 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 RFX4Q33E94 735 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 DAB2IPQ5VWQ8 1189 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 RBM43Q6ZSC3 357 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 SATL1Q86VE3 508 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 MCEMP1Q8IX19 187 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 RERGQ96A58 199 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 SEMA4BQ9NPR2 832 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 SLC27A5Q9Y2P5 690 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 RCVRNP35243 200 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 IL27RAQ6UWB1 636 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 NOA1Q8NC60 698 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 APBA2Q99767 749 aa17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 AGO4Q9HCK5 861 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-253ENST00000637927 SERPINB8P50452 374 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 MTA1Q13330 715 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 CCNI2Q6ZMN8 369 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 CCDC167Q9P0B6 97 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 VANGL2Q9ULK5 521 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 COX7A2P14406 83 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 FDFT1P37268 417 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 NPY2RP49146 381 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 BACE1P56817 501 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 TSNQ15631 228 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 SLC15A2Q16348 729 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 ZCCHC23Q6ZST2 131 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 SUSD6Q92537 303 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 ERP44Q9BS26 406 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 KCNQ5Q9NR82 932 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 USP12O75317 370 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 IL12RB1P42701 662 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 PKN1Q16512 942 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 NRF1Q16656 503 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 SCUBE3Q8IX30 993 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 TC2NQ8N9U0 490 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 CCDC54Q8NEL0 328 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 SLC22A8Q8TCC7 542 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 CAPSLQ8WWF8 208 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 RXFP2Q8WXD0 754 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 ZFP14Q9HCL3 533 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 ATP13A1Q9HD20 1204 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 BCLAF3A2AJT9 711 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 PCCBP05166 539 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 FCER2P06734 321 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 KCNJ5P48544 419 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 OR5T3Q8NGG3 340 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 FANCEQ9HB96 536 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 YARS2Q9Y2Z4 477 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 LSP1P33241 339 aa17.25■□□□□ 0.35
CACNA1A-253ENST00000637927 SYT12Q8IV01 421 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms