RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 C1orf220Q5T0J3 134 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 RNF219Q5W0B1 726 aaPredicted RBP18.74■□□□□ 0.59
CLN6-212ENST00000636020 APCDD1Q8J025 514 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 SLC22A18ASQ8N1D0 253 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 ANKRD52Q8NB46 1076 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 AZIN2Q96A70 460 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 NIF3L1Q9GZT8 377 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 GEMIN8Q9NWZ8 242 aaKnown RBP18.74■□□□□ 0.59
CLN6-212ENST00000636020 PCDHGA7Q9Y5G6 932 aa18.74■□□□□ 0.59
CLN6-212ENST00000636020 SPTBN1Q01082 2364 aaKnown RBP18.74■□□□□ 0.59
CLN6-212ENST00000636020 YJEFN3A6XGL0 299 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 E7ENQ6 273 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 STK19P49842 368 aaPredicted RBP18.73■□□□□ 0.59
CLN6-212ENST00000636020 PDX1P52945 283 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 TAS2R38P59533 333 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 HNRNPKP61978 463 aaKnown RBP eCLIP18.73■□□□□ 0.59
CLN6-212ENST00000636020 AMPD3Q01432 767 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 E2F4Q16254 413 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 FAM46CQ5VWP2 391 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 NUGGCQ68CJ6 796 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 ARHGAP17Q68EM7 881 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 MSANTD2Q6P1R3 559 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 C14orf80Q86SX3 495 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 GOLGA5Q8TBA6 731 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 FRS2Q8WU20 508 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 KLK6Q92876 244 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 NOX5Q96PH1 765 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 PREBQ9HCU5 417 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 SLC39A2Q9NP94 309 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 ABCC13Q9NSE7 274 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 DNAJC28Q9NX36 388 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 NCKIPSDQ9NZQ3 722 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 ACSL6Q9UKU0 697 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 SMC3Q9UQE7 1217 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 CEP83Q9Y592 693 aa18.73■□□□□ 0.59
CLN6-212ENST00000636020 RIOK3O14730 519 aaKnown RBP18.72■□□□□ 0.59
CLN6-212ENST00000636020 CASC3O15234 703 aaKnown RBP18.72■□□□□ 0.59
CLN6-212ENST00000636020 SLC8A3P57103 927 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 FOXK1P85037 733 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 CEBPZQ03701 1054 aaKnown RBP18.72■□□□□ 0.59
CLN6-212ENST00000636020 MAPK8IP2Q13387 824 aaPredicted RBP18.72■□□□□ 0.59
CLN6-212ENST00000636020 CRTC1Q6UUV9 634 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 UNC13DQ70J99 1090 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 ABI3BPQ7Z7G0 1075 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 DSG4Q86SJ6 1040 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 SLC9A9Q8IVB4 645 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 CCDC117Q8IWD4 279 aaPredicted RBP18.72■□□□□ 0.59
CLN6-212ENST00000636020 SLC4A11Q8NBS3 891 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 TMEM174Q8WUU8 243 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 C7orf25Q9BPX7 421 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 IMPG2Q9BZV3 1241 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 FZD3Q9NPG1 666 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 SALL4Q9UJQ4 1053 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 PPM1HQ9ULR3 514 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 PAXBP1Q9Y5B6 917 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 CSNK1G3Q9Y6M4 447 aa18.72■□□□□ 0.59
CLN6-212ENST00000636020 MORC2Q9Y6X9 1032 aaPredicted RBP18.72■□□□□ 0.59
CLN6-212ENST00000636020 A0A1W2PQU0 124 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 TYW5A2RUC4 315 aaKnown RBP18.71■□□□□ 0.59
CLN6-212ENST00000636020 LUC7L3O95232 432 aaKnown RBP18.71■□□□□ 0.59
CLN6-212ENST00000636020 AKT2P31751 481 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 NNMTP40261 264 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 AFMP43652 599 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 CLDN2P57739 230 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 ADIGQ0VDE8 80 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 ZNF284Q2VY69 593 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 PERM1Q5SV97 790 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 CFAP52Q8N1V2 620 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 ZNF548Q8NEK5 533 aaPredicted RBP18.71■□□□□ 0.59
CLN6-212ENST00000636020 TAS1R2Q8TE23 839 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 OR8D1Q8WZ84 308 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 IPO9Q96P70 1041 aaKnown RBP18.71■□□□□ 0.59
CLN6-212ENST00000636020 DDX50Q9BQ39 737 aaKnown RBP18.71■□□□□ 0.59
CLN6-212ENST00000636020 EPN3Q9H201 632 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 CUEDC2Q9H467 287 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 LRRC4Q9HBW1 653 aa18.71■□□□□ 0.59
CLN6-212ENST00000636020 PLD2O14939 933 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 XPO1O14980 1071 aaKnown RBP18.7■□□□□ 0.58
CLN6-212ENST00000636020 HNRNPA2B1P22626 353 aaKnown RBP18.7■□□□□ 0.58
CLN6-212ENST00000636020 RAD23BP54727 409 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 CLCA4Q14CN2 919 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 IGFBP7Q16270 282 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 DCAF6Q58WW2 860 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 MS4A13Q5J8X5 152 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 NEK5Q6P3R8 708 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 GCNT7Q6ZNI0 430 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 Q6ZSR6 202 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 DCP2Q8IU60 420 aaKnown RBP18.7■□□□□ 0.58
CLN6-212ENST00000636020 WDR48Q8TAF3 677 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 TATDN2Q93075 761 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 LIN37Q96GY3 246 aaPredicted RBP18.7■□□□□ 0.58
CLN6-212ENST00000636020 NUCKS1Q9H1E3 243 aaKnown RBP18.7■□□□□ 0.58
CLN6-212ENST00000636020 GPR27Q9NS67 375 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 PCDHGA4Q9Y5G9 962 aa18.7■□□□□ 0.58
CLN6-212ENST00000636020 ICE1Q9Y2F5 2266 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 ENO4A6NNW6 628 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 TBX4P57082 545 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 FZD2Q14332 565 aa18.69■□□□□ 0.58
CLN6-212ENST00000636020 DRAP1Q14919 205 aaPredicted RBP18.69■□□□□ 0.58
CLN6-212ENST00000636020 NR0B2Q15466 257 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms