RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 GMNCA6NCL1 334 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 F5H5T6 163 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 POC1B-GALNT4F8VUJ3 575 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 MATN3O15232 486 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 ZBTB24O43167 697 aaPredicted RBP11.91□□□□□ -0.5
TP53-228ENST00000635293 CACNG3O60359 315 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 MAFKO60675 156 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 AVILO75366 819 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 NFKB1P19838 968 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 TACR2P21452 398 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 DNAJB2P25686 324 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 SLC11A2P49281 568 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 HARS2P49590 506 aaKnown RBP11.91□□□□□ -0.5
TP53-228ENST00000635293 TWF1Q12792 350 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 RAP1GAP2Q684P5 730 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 KCTD11Q693B1 232 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 FBXL22Q6P050 247 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 GSDMBQ8TAX9 411 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 ZSCAN18Q8TBC5 510 aaPredicted RBP11.91□□□□□ -0.5
TP53-228ENST00000635293 ZNF473Q8WTR7 871 aaKnown RBP11.91□□□□□ -0.5
TP53-228ENST00000635293 PSMG2Q969U7 264 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 CFAP36Q96G28 342 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 LRRC40Q9H9A6 602 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 MPP6Q9NZW5 540 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 LZTS1Q9Y250 596 aa11.91□□□□□ -0.5
TP53-228ENST00000635293 SDR42E2A6NKP2 422 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 TEX28O15482 410 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 COCHO43405 550 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 ACSL4O60488 711 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 LATS1O95835 1130 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 OAS1P00973 400 aaKnown RBP11.9□□□□□ -0.5
TP53-228ENST00000635293 JCHAINP01591 159 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 HMBSP08397 361 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 CCNB1P14635 433 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 PRKCHP24723 683 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 CD68P34810 354 aaPredicted RBP11.9□□□□□ -0.5
TP53-228ENST00000635293 MSH2P43246 934 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 SEC24CP53992 1094 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 YBEYP58557 167 aaPredicted RBP11.9□□□□□ -0.5
TP53-228ENST00000635293 PARP15Q460N3 678 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 NAPEPLDQ6IQ20 393 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 ADGRD1Q6QNK2 874 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 MICALCLQ6ZW33 695 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 CYS1Q717R9 158 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 TRABD2AQ86V40 505 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 PHOSPHO2Q8TCD6 241 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 HERVK_113Q902F9 699 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 BADQ92934 168 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 RPRD1AQ96P16 312 aaPredicted RBP11.9□□□□□ -0.5
TP53-228ENST00000635293 AGAP3Q96P47 875 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 FCRL5Q96RD9 977 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 GORASP1Q9BQQ3 440 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 NOL6Q9H6R4 1146 aaKnown RBP11.9□□□□□ -0.5
TP53-228ENST00000635293 PPANQ9NQ55 473 aaKnown RBP11.9□□□□□ -0.5
TP53-228ENST00000635293 ZNF212Q9UDV6 495 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 PCDHA11Q9Y5I1 949 aa11.9□□□□□ -0.5
TP53-228ENST00000635293 ATXN2Q99700 1313 aaKnown RBP11.9□□□□□ -0.51
TP53-228ENST00000635293 RASA4BC9J798 803 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 RASA4O43374 803 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 ANXA9O76027 345 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 PGAM1P18669 254 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 PAPOLAP51003 745 aaKnown RBP11.89□□□□□ -0.51
TP53-228ENST00000635293 MTM1Q13496 603 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 NAB1Q13506 487 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 RABGAP1LQ5R372 815 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 TMEM240Q5SV17 173 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 NADSYN1Q6IA69 706 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 ZNF449Q6P9G9 518 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 UNC5AQ6ZN44 842 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 ARHGAP36Q6ZRI8 547 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 CCDC149Q6ZUS6 474 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 LINC00523Q86TU6 105 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 HERC6Q8IVU3 1022 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 SLC44A1Q8WWI5 657 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 AUTS2Q8WXX7 1259 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 DDX50Q9BQ39 737 aaKnown RBP11.89□□□□□ -0.51
TP53-228ENST00000635293 MLPHQ9BV36 600 aaPredicted RBP11.89□□□□□ -0.51
TP53-228ENST00000635293 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
TP53-228ENST00000635293 SSU72Q9NP77 194 aaKnown RBP11.89□□□□□ -0.51
TP53-228ENST00000635293 CASS4Q9NQ75 786 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 NDFIP2Q9NV92 336 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 TBK1Q9UHD2 729 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 IPO11Q9UI26 975 aaKnown RBP11.89□□□□□ -0.51
TP53-228ENST00000635293 AAR2Q9Y312 384 aaKnown RBP11.89□□□□□ -0.51
TP53-228ENST00000635293 RWDD3Q9Y3V2 267 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 MAD1L1Q9Y6D9 718 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 IKBKGQ9Y6K9 419 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 ADH1AP07327 375 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 CHN1P15882 459 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 KCNQ1P51787 676 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 SLC18A1P54219 525 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 GEMP55040 296 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 TNK2Q07912 1038 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 EFTUD2Q15029 972 aaKnown RBP eCLIP11.89□□□□□ -0.513e-8■■■■■ 33.6
TP53-228ENST00000635293 KBTBD12Q3ZCT8 623 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 PABPC1LQ4VXU2 614 aaKnown RBP11.89□□□□□ -0.51
TP53-228ENST00000635293 ALFQ53S48 1182 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 ARMC3Q5W041 872 aa11.89□□□□□ -0.51
TP53-228ENST00000635293 DNAJB7Q7Z6W7 309 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms