RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 TMC6Q7Z403 805 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 METTL3Q86U44 580 aaKnown RBP11.42□□□□□ -0.58
DDX41-219ENST00000629036 PYROXD2Q8N2H3 581 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 TC2NQ8N9U0 490 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 NETO1Q8TDF5 533 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 FRS2Q8WU20 508 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 RLN3Q8WXF3 142 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 ZNF653Q96CK0 615 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 CHP1Q99653 195 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 PACSIN1Q9BY11 444 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 THAP2Q9H0W7 228 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 POLMQ9NP87 494 aaPredicted RBP11.42□□□□□ -0.58
DDX41-219ENST00000629036 PRSS16Q9NQE7 514 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 KIAA1522Q9P206 1035 aaPredicted RBP11.42□□□□□ -0.58
DDX41-219ENST00000629036 CNOT8Q9UFF9 292 aaKnown RBP11.42□□□□□ -0.58
DDX41-219ENST00000629036 FZD10Q9ULW2 581 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 ERVW-1Q9UQF0 538 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 PAXBP1Q9Y5B6 917 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 A0A0D9SEW6 157 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 SSU72P8A0A1W2PR75 194 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 H0Y626 953 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 LRCH4O75427 683 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 EPN2O95208 641 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 CD160O95971 181 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 ASLP04424 464 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 TPM3P06753 285 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 SRPRAP08240 638 aaKnown RBP11.41□□□□□ -0.58
DDX41-219ENST00000629036 MYBL1P10243 752 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 VAV1P15498 845 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 POLR2EP19388 210 aaKnown RBP11.41□□□□□ -0.58
DDX41-219ENST00000629036 FECHP22830 423 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 GLDCP23378 1020 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 IL1R2P27930 398 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 ZNF75DP51815 510 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 ADKP55263 362 aaKnown RBP11.41□□□□□ -0.58
DDX41-219ENST00000629036 GFPT1Q06210 699 aaPredicted RBP11.41□□□□□ -0.58
DDX41-219ENST00000629036 SLC18A3Q16572 532 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 CA9Q16790 459 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 HNRNPA1L2Q32P51 320 aaKnown RBP11.41□□□□□ -0.58
DDX41-219ENST00000629036 C9orf64Q5T6V5 341 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 ACBD5Q5T8D3 534 aaPredicted RBP11.41□□□□□ -0.58
DDX41-219ENST00000629036 ALKBH5Q6P6C2 394 aaKnown RBP11.41□□□□□ -0.58
DDX41-219ENST00000629036 SERPINA13PQ6UXR4 307 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 TFAP2DQ7Z6R9 452 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 CPNE8Q86YQ8 564 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 OR8K1Q8NGG5 319 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 UCMAQ8WVF2 138 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 TMEM248Q9NWD8 314 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 OR12D3Q9UGF7 316 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 SLCO3A1Q9UIG8 710 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 RAB23Q9ULC3 237 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 INVSQ9Y283 1065 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 NBEAQ8NFP9 2946 aa11.41□□□□□ -0.58
DDX41-219ENST00000629036 TTC34A8MYJ7 566 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 ATP9BO43861 1147 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 GDF9O60383 454 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 SNAP91O60641 907 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 SIN3BO75182 1162 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 ZNF821O75541 412 aaPredicted RBP11.4□□□□□ -0.58
DDX41-219ENST00000629036 ALDH1A2O94788 518 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 MT-CO1P00395 513 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 EPHX1P07099 455 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 L1CAMP32004 1257 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 GALCP54803 685 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 AIF1P55008 147 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 ECT2LQ008S8 904 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 FNDC3BQ53EP0 1204 aaKnown RBP11.4□□□□□ -0.58
DDX41-219ENST00000629036 PLA2G2CQ5R387 149 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 RNF219Q5W0B1 726 aaPredicted RBP11.4□□□□□ -0.58
DDX41-219ENST00000629036 DCUN1D2Q6PH85 259 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 PRR23BQ6ZRT6 265 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 SETD3Q86TU7 594 aaPredicted RBP11.4□□□□□ -0.58
DDX41-219ENST00000629036 NIPA2Q8N8Q9 360 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 DCAF4L2Q8NA75 395 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 OR7D4Q8NG98 312 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 OR2T3Q8NH03 318 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 PTPRN2Q92932 1015 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 FAM131CQ96AQ9 280 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 TRIM11Q96F44 468 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 MRFAP1L1Q96HT8 127 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 RPL10LQ96L21 214 aaKnown RBP11.4□□□□□ -0.58
DDX41-219ENST00000629036 SNRNP25Q9BV90 132 aaKnown RBP11.4□□□□□ -0.58
DDX41-219ENST00000629036 ZYG11BQ9C0D3 744 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 KLC2Q9H0B6 622 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 RSPH9Q9H1X1 276 aaPredicted RBP11.4□□□□□ -0.58
DDX41-219ENST00000629036 GPATCH2LQ9NWQ4 482 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 VPS51Q9UID3 782 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 HS3ST2Q9Y278 367 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 CABIN1Q9Y6J0 2220 aa11.4□□□□□ -0.58
DDX41-219ENST00000629036 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.39□□□□□ -0.59
DDX41-219ENST00000629036 ILVBLA1L0T0 632 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 WASH4PA8MWX3 477 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 RNF103O00237 685 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 ATP5BP06576 529 aaKnown RBP11.39□□□□□ -0.59
DDX41-219ENST00000629036 RETP07949 1114 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 RHOQP17081 205 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 PSMA2P25787 234 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 MIPP30301 263 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 RPS14P62263 151 aaKnown RBP11.39□□□□□ -0.59
DDX41-219ENST00000629036 ARF5P84085 180 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms