RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 EIF2DP41214 584 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 NDST2P52849 883 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 YBEYP58557 167 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 FSCBQ5H9T9 825 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 C12orf40Q86WS4 652 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 CCDC105Q8IYK2 499 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 KIF18AQ8NI77 898 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 ACTRT1Q8TDG2 376 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 LMLNQ96KR4 655 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 LRRC19Q9H756 370 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 KMT2EQ8IZD2 1858 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 APOC4-APOC2K7ER74 178 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 ZNF185O15231 689 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 RAMP2O60895 175 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 TULP3O75386 442 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 APOC2P02655 101 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 FGGP02679 453 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 RHOCP08134 193 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 DYNLT1P63172 113 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 GBE1Q04446 702 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 PON2Q15165 354 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 ARHGAP12Q8IWW6 846 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 NAT16Q8N8M0 369 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 OR52K2Q8NGK3 314 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 ZNF592Q92610 1267 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 OSBPL6Q9BZF3 934 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 MAGEH1Q9H213 219 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 DNAJC17Q9NVM6 304 aaKnown RBP20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 KIAA1522Q9P206 1035 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 SLC27A6Q9Y2P4 619 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 RAD54BQ9Y620 910 aa20.33■□□□□ 0.85
PDLIM2-221ENST00000622702 CHD5Q8TDI0 1954 aa20.33■□□□□ 0.84
PDLIM2-221ENST00000622702 NUP205Q92621 2012 aa20.33■□□□□ 0.84
PDLIM2-221ENST00000622702 MFSD11O43934 449 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 CISD3P0C7P0 127 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 HLA-FP30511 346 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 ETFBP38117 255 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 OPRD1P41143 372 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 NR2C2P49116 596 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 GNA12Q03113 381 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 LMAN2Q12907 356 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 SLC12A1Q13621 1099 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 PARP15Q460N3 678 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 CREG2Q8IUH2 290 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 ZNF687Q8N1G0 1237 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 MAIP1Q8WWC4 291 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 MS4A14Q96JA4 679 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 NAP1L3Q99457 506 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 DTLQ9NZJ0 730 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 DEC1Q9P2X7 70 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 RNF14Q9UBS8 474 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 OR51B4Q9Y5P0 310 aa20.32■□□□□ 0.84
PDLIM2-221ENST00000622702 TCRBV7S2A1N4TA0A589 114 aa20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 PGRMC1O00264 195 aaKnown RBP20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 NCAM2O15394 837 aa20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 DGKGP49619 791 aa20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 PLK1P53350 603 aa20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 SLC10A2Q12908 348 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 POLD3Q15054 466 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 NAIF1Q69YI7 327 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 KIAA0907Q7Z7F0 614 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 TTC13Q8NBP0 860 aa20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 P3H4Q92791 437 aa20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 ALG14Q96F25 216 aa20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 CELF6Q96J87 481 aaKnown RBP20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 FEM1AQ9BSK4 669 aa20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 SLC39A8Q9C0K1 460 aa20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 ABCB8Q9NUT2 735 aa20.31■□□□□ 0.84
PDLIM2-221ENST00000622702 A0A0D9SEW6 157 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 RASA4BC9J798 803 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 RASA4O43374 803 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 PABPC1P11940 636 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 PECAM1P16284 738 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 CD70P32970 193 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 CSKP41240 450 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 SLC6A11P48066 632 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 GALK1P51570 392 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 FZD5Q13467 585 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 LONRF2Q1L5Z9 754 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 CCDC181Q5TID7 509 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 RNF219Q5W0B1 726 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 GRAMD4Q6IC98 578 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 BZW1Q7L1Q6 419 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 PHTF2Q8N3S3 785 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 ARHGEF2Q92974 986 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 OLFM3Q96PB7 478 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 P2RY13Q9BPV8 354 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 LMAN1LQ9HAT1 526 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 FBRSL1Q9HCM7 1045 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 DLGAP2Q9P1A6 1054 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 GGA2Q9UJY4 613 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 HEY1Q9Y5J3 304 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 ZNF318Q5VUA4 2279 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 ARHGAP42A6NI28 874 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 TRIM24O15164 1050 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 MX2P20592 715 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 MZF1P28698 734 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 GALNT2Q10471 571 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms