RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 RNF43Q68DV7 783 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 RFWD3Q6PCD5 774 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 TRIM72Q6ZMU5 477 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 TOGARAM2Q6ZUX3 1019 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 ARCQ7LC44 396 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 BNIPLQ7Z465 357 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 VN1R5Q7Z5H4 357 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 PHLDB2Q86SQ0 1253 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 PHF13Q86YI8 300 aaPredicted RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 UNC45BQ8IWX7 931 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 RPLP0P6Q8NHW5 317 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 ATOH1Q92858 354 aaPredicted RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 TMA16Q96EY4 203 aaKnown RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 MYEOVQ96EZ4 313 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 XPO6Q96QU8 1125 aaKnown RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 TCF12Q99081 682 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 NPY6RQ99463 290 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 NUP58Q9BVL2 599 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 XPO4Q9C0E2 1151 aaKnown RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 IRF2BPLQ9H1B7 796 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 HAUS4Q9H6D7 363 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 SYNCQ9H7C4 482 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 ARHGEF4Q9NR80 690 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 FAM86C1Q9NVL1 165 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 DNAJC17Q9NVM6 304 aaKnown RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 DEC1Q9P2X7 70 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 XPO7Q9UIA9 1087 aaKnown RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 CAPN11Q9UMQ6 739 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 SLC27A6Q9Y2P4 619 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 TBC1D3BA6NDS4 549 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 PROB1E7EW31 1015 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 GOLGA8SH3BPF8 625 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 H3BRJ5 948 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 I6L893 689 aaPredicted RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 M0QYT0 321 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 ENDOD1O94919 500 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 GJB6O95452 261 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 CYBBP04839 570 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 GYPCP04921 128 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 APODP05090 189 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 CCDC172P0C7W6 258 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 SKILP12757 684 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 HOXD9P28356 352 aaPredicted RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 HOXA6P31267 233 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 GBP1P32455 592 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 FLT3P36888 993 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 NBL1P41271 181 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 SLC11A2P49281 568 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 CXCR3P49682 368 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 GSCP56915 257 aaPredicted RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 RNASE9P60153 205 aaKnown RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 MRPS21P82921 87 aaKnown RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 PPP2R5DQ14738 602 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 ASIC2Q16515 512 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 GEN1Q17RS7 908 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 SLC25A52Q3SY17 297 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 C2orf27AQ580R0 203 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 MS4A13Q5J8X5 152 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 C10orf76Q5T2E6 689 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 MPP7Q5T2T1 576 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 FAM102AQ5T9C2 384 aaPredicted RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 PIK3R6Q5UE93 754 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 HGSNATQ68CP4 663 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 GRAMD4Q6IC98 578 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 ACAD10Q6JQN1 1059 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 MON1BQ7L1V2 547 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 SYT13Q7L8C5 426 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 ZNF571Q7Z3V5 609 aaPredicted RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 KIAA0907Q7Z7F0 614 aaPredicted RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 CCNJLQ8IV13 435 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 EMC1Q8N766 993 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 TERB1Q8NA31 727 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 IL17RCQ8NAC3 791 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 ZBTB44Q8NCP5 570 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 RNF214Q8ND24 703 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 JOSD2Q8TAC2 188 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 DDI1Q8WTU0 396 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 CPLX3Q8WVH0 158 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 SYN2Q92777 582 aaPredicted RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 CCDC74AQ96AQ1 378 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 PGAP3Q96FM1 320 aaPredicted RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 LMLNQ96KR4 655 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 BTN2A3PQ96KV6 586 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 CFAP57Q96MR6 1250 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 PRICKLE1Q96MT3 831 aaPredicted RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 TBCBQ99426 244 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 PRMT1Q99873 361 aaKnown RBP6.75□□□□□ -1.33
BRCC3-209ENST00000620502 C11orf70Q9BRQ4 267 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 SLC2A11Q9BYW1 496 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 FAM204AQ9H8W3 233 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 NPHS2Q9NP85 383 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 ZDHHC4Q9NPG8 344 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 ANLNQ9NQW6 1124 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 PIGVQ9NUD9 493 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 DDIT4Q9NX09 232 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 RRN3Q9NYV6 651 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 TAS2R14Q9NYV8 317 aa6.75□□□□□ -1.33
BRCC3-209ENST00000620502 ADAM22Q9P0K1 906 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms