RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 FBXL20Q96IG2 436 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 PIF1Q9H611 641 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 TASP1Q9H6P5 420 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 KCND2Q9NZV8 630 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 COX16Q9P0S2 106 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 DCDC2Q9UHG0 476 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 AGO2Q9UKV8 859 aaKnown RBP9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 GIT1Q9Y2X7 761 aa9.97□□□□□ -0.81
TNFAIP3-210ENST00000620204 H3BMQ9 156 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 AGKQ53H12 422 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 TBCELQ5QJ74 424 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 SH3PXD2AQ5TCZ1 1133 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 TAS2R42Q7RTR8 314 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 DNAAF3Q8N9W5 541 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 CCDC17Q96LX7 622 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 NLRP4Q96MN2 994 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 COG8Q96MW5 612 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 ADPGKQ9BRR6 497 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 ZBED2Q9BTP6 218 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 STN1Q9H668 368 aaKnown RBP9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 FAM198AQ9UFP1 575 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 PRPF19Q9UMS4 504 aaKnown RBP9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 USP18Q9UMW8 372 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 CDYLQ9Y232 598 aa9.96□□□□□ -0.81
TNFAIP3-210ENST00000620204 SLC15A5A6NIM6 579 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 KPNA7A9QM74 516 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 E7ESA3 106 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 HTRA2O43464 458 aaPredicted RBP9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 HMGCRP04035 888 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 ALDH4A1P30038 563 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 EPHX2P34913 555 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 GARSP41250 739 aaKnown RBP9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 GSSP48637 474 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 TFDP2Q14188 446 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 RAB39AQ14964 217 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 Q3C1V9 767 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 MTERF2Q49AM1 385 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 SNRNP48Q6IEG0 339 aaKnown RBP9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 PHF13Q86YI8 300 aaPredicted RBP9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 CLIP4Q8N3C7 705 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 SPATA6LQ8N4H0 392 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 DCAF4Q8WV16 495 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 NRBF2Q96F24 287 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 ANKRD36BP1Q96IX9 119 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 MSTO1Q9BUK6 570 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 CDH19Q9H159 772 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 PRDM16Q9HAZ2 1276 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 APOBEC3GQ9HC16 384 aaKnown RBP9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 PKD2L2Q9NZM6 624 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 PSAT1Q9Y617 370 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 C10orf71Q711Q0 1435 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 USP12O75317 370 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 CHEK2O96017 543 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 RPL26P61254 145 aaKnown RBP9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 GTF2BQ00403 316 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 TUBB3Q13509 450 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 PCLAFQ15004 111 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 C15orf59Q2T9L4 293 aaPredicted RBP9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 SH2D5Q6ZV89 423 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 RNF135Q8IUD6 432 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 OR5B17Q8NGF7 314 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 TBC1D15Q8TC07 691 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 CLIP3Q96DZ5 547 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 ZDHHC15Q96MV8 337 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 RPF2Q9H7B2 306 aaKnown RBP9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 POPDC2Q9HBU9 364 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 CYP26B1Q9NR63 512 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 SEPT9Q9UHD8 586 aaPredicted RBP9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 TLK1Q9UKI8 766 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 SLC27A5Q9Y2P5 690 aa9.96□□□□□ -0.82
TNFAIP3-210ENST00000620204 C9JVG2 144 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 PFDN6O15212 129 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 MFN2O95140 757 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 MYL4P12829 197 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 PDGFRAP16234 1089 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 PRDX6P30041 224 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 SERPINB1P30740 379 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 GNL1P36915 607 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 NEK2P51955 445 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 CHERPQ8IWX8 916 aaKnown RBP9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 MICALL2Q8IY33 904 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 ZCCHC7Q8N3Z6 543 aaKnown RBP9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 MCUQ8NE86 351 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 CANT1Q8WVQ1 401 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 DLG3Q92796 817 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 VCPIP1Q96JH7 1222 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 RANBP9Q96S59 729 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 RSAD1Q9HA92 442 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 MRGBPQ9NV56 204 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 FBXO28Q9NVF7 368 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 ZNF70Q9UC06 446 aaPredicted RBP9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 SLC39A10Q9ULF5 831 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 SLX4Q8IY92 1834 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 TRIM64CA6NLI5 447 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 TAF4O00268 1085 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 PHGDHO43175 533 aaKnown RBP9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 B4GAT1O43505 415 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 BAIAP3O94812 1187 aa9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 ATP5BP06576 529 aaKnown RBP9.95□□□□□ -0.82
TNFAIP3-210ENST00000620204 HSPA8P11142 646 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms