RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 UGCGQ16739 394 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 VMP1Q96GC9 406 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CRELD1Q96HD1 420 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SPATA5L1Q9BVQ7 753 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MAF1Q9H063 256 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TAS2R7Q9NYW3 318 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CCNE2O96020 404 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 NAPEPLDQ6IQ20 393 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 LPCAT2Q7L5N7 544 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 AGR3Q8TD06 166 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 BRSK1Q8TDC3 778 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.13□□□□□ -1.91
NEB-220ENST00000618972 PGBD4Q96DM1 585 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 FBXO6Q9NRD1 293 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 SMYD2Q9NRG4 433 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 NDUFAF1Q9Y375 327 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PSMD11O00231 422 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PRPSAP2O60256 369 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TPBGLP0DKB5 382 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PDGFRAP16234 1089 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CCND2P30279 289 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TFAMQ00059 246 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 SMCO1Q147U7 214 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 STXBP5Q5T5C0 1151 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SLFN11Q7Z7L1 901 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 DNAJA4Q8WW22 397 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 PLEKHG4BQ96PX9 1271 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SLITRK2Q9H156 845 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ABCB11O95342 1321 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SAMD9Q5K651 1589 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 NDUFS2O75306 463 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TGM2P21980 687 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CDK9P50750 372 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 ARHGAP17Q68EM7 881 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 DEF8Q6ZN54 512 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 LDHDQ86WU2 507 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ZNF512BQ96KM6 892 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 APBA2Q99767 749 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CCNB1IP1Q9NPC3 277 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 HMGXB4Q9UGU5 601 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 NUFIP1Q9UHK0 495 aaKnown RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 ANAPC7Q9UJX3 599 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 DNPEPQ9ULA0 475 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CNTNAP5Q8WYK1 1306 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CEMIPQ8WUJ3 1361 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 NOTOA8MTQ0 251 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TP73O15350 636 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SIN3BO75182 1162 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 RLN2P04090 185 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TFE3P19532 575 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 PTX3P26022 381 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 NDUFAF6Q330K2 333 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TMEM35BQ8NCS4 154 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 FAM172AQ8WUF8 416 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TRAPPC12Q8WVT3 735 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CYP4F12Q9HCS2 524 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PDPK1O15530 556 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 UAP1L1Q3KQV9 507 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TREML1Q86YW5 311 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 DCLK2Q8N568 766 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TBC1D19Q8N5T2 526 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PMF1-BGLAPU3KQ54 211 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 APOL1O14791 398 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ZSCAN9O15535 394 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 HIST1H2AGP0C0S8 130 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 HIST1H2ADP20671 130 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 NFYCQ13952 458 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ERAP2Q6P179 960 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ZYG11AQ6WRX3 759 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CYP4Z2PQ8N1L4 340 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CCNYQ8ND76 341 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ASB15Q8WXK1 588 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 FAM162AQ96A26 154 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 HIST1H2AHQ96KK5 128 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 HIST1H2AJQ99878 128 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 H2AFJQ9BTM1 129 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TMEM39BQ9GZU3 492 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 KCNK13Q9HB14 408 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 RAPGEFL1Q9UHV5 662 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 BAIAP2Q9UQB8 552 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PGRMC2O15173 223 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 KRT19P08727 400 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SLC9A3P48764 834 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PSME3P61289 254 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 GRTP1Q5TC63 336 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 STRIP1Q5VSL9 837 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 FAAH2Q6GMR7 532 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 NAT14Q8WUY8 206 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 DMTF1Q9Y222 760 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 AIM2O14862 343 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 CXCR3P49682 368 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 KAT2AQ92830 837 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SLC7A6OSQ96CW6 309 aaPredicted RBP3.13□□□□□ -1.91
NEB-220ENST00000618972 YME1L1Q96TA2 773 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 TCEAL7Q9BRU2 100 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MND1Q9BWT6 205 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 MARCH7Q9H992 704 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 ZNF536O15090 1300 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 SPATA31A6Q5VVP1 1343 aa3.13□□□□□ -1.91
NEB-220ENST00000618972 PTDSS1P48651 473 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms