RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 CALN1Q9BXU9 219 aa16.82■□□□□ 0.28
SPTSSB-204ENST00000617024 MUC3BQ9H195 1237 aa16.82■□□□□ 0.28
SPTSSB-204ENST00000617024 KLHL11Q9NVR0 708 aa16.82■□□□□ 0.28
SPTSSB-204ENST00000617024 ELOVL2Q9NXB9 296 aa16.82■□□□□ 0.28
SPTSSB-204ENST00000617024 ZNF212Q9UDV6 495 aa16.82■□□□□ 0.28
SPTSSB-204ENST00000617024 PYCARDQ9ULZ3 195 aa16.82■□□□□ 0.28
SPTSSB-204ENST00000617024 NEU3Q9UQ49 428 aa16.82■□□□□ 0.28
SPTSSB-204ENST00000617024 PCDHA3Q9Y5H8 950 aa16.82■□□□□ 0.28
SPTSSB-204ENST00000617024 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
SPTSSB-204ENST00000617024 CAPN6Q9Y6Q1 641 aa16.82■□□□□ 0.28
SPTSSB-204ENST00000617024 COL4A3Q01955 1670 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 CCDC66A2RUB6 948 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 LRRD1A4D1F6 860 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 ZNF500O60304 480 aaPredicted RBP16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 ZRANB2O95218 330 aaKnown RBP eCLIP16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 KRT1P04264 644 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 ATP5BP06576 529 aaKnown RBP16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 CD48P09326 243 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 ERCC2P18074 760 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 AMPD1P23109 780 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 IL4RP24394 825 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 CTNNA2P26232 953 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 MZF1P28698 734 aaPredicted RBP16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 CSKP41240 450 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 PLK1P53350 603 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 SEC13P55735 322 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 MMRN1Q13201 1228 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 DPYSQ14117 519 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 DPYSL3Q14195 570 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 ANKRD20A8PQ5CZ79 823 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 PITRM1Q5JRX3 1037 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 EMC10Q5UCC4 262 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 MBLAC2Q68D91 279 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 ADIPOR2Q86V24 386 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 SFTPA1Q8IWL2 248 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 RCOR2Q8IZ40 523 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 KCNV2Q8TDN2 545 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 EZH1Q92800 747 aaPredicted RBP16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 CLDN23Q96B33 292 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 CSPG4P5Q96PW8 444 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 MAK16Q9BXY0 300 aaKnown RBP16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 CIPCQ9C0C6 399 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 RBM12Q9NTZ6 932 aaKnown RBP16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 STARD13Q9Y3M8 1113 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 R4GN57 208 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 CFAP47Q6ZTR5 3102 aa16.81■□□□□ 0.28
SPTSSB-204ENST00000617024 MIF4GDA9UHW6 222 aaKnown RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 FTCDO95954 541 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 LMNAP02545 664 aaKnown RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 DCNP07585 359 aaKnown RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 CTNNA1P35221 906 aaKnown RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 TIE1P35590 1138 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 ETFBP38117 255 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 RPS9P46781 194 aaKnown RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 YBEYP58557 167 aaPredicted RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 MRPS21P82921 87 aaKnown RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 GNA12Q03113 381 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 POLD3Q15054 466 aaPredicted RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 EIF4HQ15056 248 aaKnown RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 PLEKHG6Q3KR16 790 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 TMEM215Q68D42 235 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 VSIG1Q86XK7 387 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 KIAA2013Q8IYS2 634 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 KATNAL2Q8IYT4 538 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 APCDD1Q8J025 514 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 LZTR1Q8N653 840 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 UBL4BQ8N7F7 174 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 TRIM58Q8NG06 486 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 OR52K2Q8NGK3 314 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 TTC17Q96AE7 1141 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 RNF25Q96BH1 459 aaPredicted RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 ZNF670Q9BS34 389 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 MAGEH1Q9H213 219 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 NDFIP2Q9NV92 336 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 VPS28Q9UK41 221 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 INTS6Q9UL03 887 aaKnown RBP16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 PLA2G4CQ9UP65 541 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 ACACBO00763 2458 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 KIAA1549LQ6ZVL6 1849 aa16.8■□□□□ 0.28
SPTSSB-204ENST00000617024 A0A0D9SEW6 157 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 GOLGA6L9A6NEM1 432 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 ZNF487B1APH4 448 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 RAMP2O60895 175 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 RNF40O75150 1001 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 ASLP04424 464 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 MAGEA9P43362 315 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 NDST2P52849 883 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 RWDD2BP57060 319 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 SULT2A1Q06520 285 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 FUT11Q495W5 492 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 C2orf27AQ580R0 203 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 TMCO3Q6UWJ1 677 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 DGLUCYQ7Z3D6 616 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 UMODL1-AS1Q8N2C9 162 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 EXD1Q8NHP7 514 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 KRT35Q92764 455 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 ARHGEF2Q92974 986 aaKnown RBP16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 ALG14Q96F25 216 aa16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 RBM41Q96IZ5 413 aaKnown RBP16.79■□□□□ 0.28
SPTSSB-204ENST00000617024 RNF157Q96PX1 679 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms