RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 RPL6Q02878 288 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PPP2R5DQ14738 602 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PLEKHA7Q6IQ23 1121 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ATP6V0D2Q8N8Y2 350 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TC2NQ8N9U0 490 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 SPC24Q8NBT2 197 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 HJURPQ8NCD3 748 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 FAM81BQ96LP2 452 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 HSPA12BQ96MM6 686 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 KCTD15Q96SI1 283 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 MYOCQ99972 504 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ZWILCHQ9H900 591 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 SEMA4GQ9NTN9 838 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 NCDNQ9UBB6 729 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 VPS28Q9UK41 221 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 NENFQ9UMX5 172 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ACACBO00763 2458 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 MAP1BP46821 2468 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TMEM191CA6NGB0 347 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TMEM110-MUSTN1A8MSY1 372 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 RTN2O75298 545 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PRKCGP05129 697 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 POLR2EP19388 210 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PSMA2P25787 234 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 MIPP30301 263 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TAS2R40P59535 323 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PPP6R3Q5H9R7 873 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ATXN7L2Q5T6C5 722 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 MANEALQ5VSG8 457 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 DCUN1D2Q6PH85 259 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 NLRP14Q86W24 1093 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF677Q86XU0 584 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 GRIN3AQ8TCU5 1115 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PGAP3Q96FM1 320 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 MSANTD3Q96H12 275 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 SNRNP25Q9BV90 132 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TRIM5Q9C035 493 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 MUC3BQ9H195 1237 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 NEUROG2Q9H2A3 272 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PRDM16Q9HAZ2 1276 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 IL21RQ9HBE5 538 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ABHD10Q9NUJ1 306 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ASNSD1Q9NWL6 643 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 USP18Q9UMW8 372 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 LUC7L2Q9Y383 392 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 LNP1A1A4G5 178 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 J3KR12 359 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 CASC3O15234 703 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 SART1O43290 800 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TOP3BO95985 862 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 MAT2AP31153 395 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF143P52747 638 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 RPS14P62263 151 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ZBED6P86452 979 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ECT2LQ008S8 904 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 DLG2Q15700 870 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 SKOR2Q2VWA4 1001 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 CCDC122Q5T0U0 273 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 SPECC1LQ69YQ0 1117 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 BEND5Q7L4P6 421 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 MGAQ8IWI9 3026 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 AHI1Q8N157 1196 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ARID1BQ8NFD5 2236 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 RUBCNQ92622 972 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PLA2G4CQ9UP65 541 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ITM2BQ9Y287 266 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF510Q9Y2H8 683 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 A0A1B0GVM2 712 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TCAF2A6NFQ2 919 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 SOWAHDA6NJG2 315 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 INSIG1O15503 277 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ATG13O75143 517 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 SRCP12931 536 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TNNT1P13805 278 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 DRD3P35462 400 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 MPLP40238 635 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 RGRP47804 291 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PSMD8P48556 350 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PPP2CBP62714 309 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PPP2CAP67775 309 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 C1QBPQ07021 282 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TBX2Q13207 712 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 NNTQ13423 1086 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PMS2CLQ68D20 193 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ALKBH5Q6P6C2 394 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 HSPH1Q92598 858 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TTC17Q96AE7 1141 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ACDQ96AP0 544 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 SIPA1Q96FS4 1042 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 PRRX2Q99811 253 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 NUP85Q9BW27 656 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 ISCUQ9H1K1 167 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 MIR1-1HGQ9H1L0 117 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 KCNH6Q9H252 994 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 DHX35Q9H5Z1 703 aaKnown RBP5.85□□□□□ -1.47
CPNE3-208ENST00000614678 TRIM10Q9UDY6 481 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 FZD10Q9ULW2 581 aa5.85□□□□□ -1.47
CPNE3-208ENST00000614678 STAP1Q9ULZ2 295 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms