RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	FAM46C	Q5VWP2	391 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	GJB7	Q6PEY0	223 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	IQCH	Q86VS3	1027 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	ZDHHC17	Q8IUH5	632 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	MLKL	Q8NB16	471 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	C1orf131	Q8NDD1	294 aa	Known RBP	11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	SAP25	Q8TEE9	199 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	NT5C3B	Q969T7	300 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	SCUBE2	Q9NQ36	999 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	GDF3	Q9NR23	364 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	RRN3	Q9NYV6	651 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	FTSJ1	Q9UET6	329 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	PPM1H	Q9ULR3	514 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	DMTF1	Q9Y222	760 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	GTF3C3	Q9Y5Q9	886 aa		11.46	□□□□□ -0.57
CBWD1-222	ENST00000613508	PLXNA2	O75051	1894 aa		11.46	□□□□□ -0.58
CBWD1-222	ENST00000613508	TMEM131	Q92545	1883 aa		11.46	□□□□□ -0.58
CBWD1-222	ENST00000613508	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	TLR4	O00206	839 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	WNT9A	O14904	365 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	MCF2L	O15068	1137 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	PLRG1	O43660	514 aa	Known RBP	11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	CLDN11	O75508	207 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	DAB1	O75553	588 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	ERBB2	P04626	1255 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	VAV1	P15498	845 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	NOS2	P35228	1153 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	USP8	P40818	1118 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	CXCR3	P49682	368 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	NXPH1	P58417	271 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	SLC6A3	Q01959	620 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	APBA1	Q02410	837 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	CENPC	Q03188	943 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	ARHGAP44	Q17R89	818 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	SLC45A4	Q5BKX6	768 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	NAPEPLD	Q6IQ20	393 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	FAM183BP	Q6ZVS7	135 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	TMPRSS12	Q86WS5	348 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	TRIM69	Q86WT6	500 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	CIR1	Q86X95	450 aa	Predicted RBP	11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	FAM71A	Q8IYT1	594 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	OXR1	Q8N573	874 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	MFSD2A	Q8NA29	543 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	OR14C36	Q8NHC7	312 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	MDM1	Q8TC05	714 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	OR8D1	Q8WZ84	308 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	PGAP3	Q96FM1	320 aa	Predicted RBP	11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	SERAC1	Q96JX3	654 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	RPRD1A	Q96P16	312 aa	Predicted RBP	11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	NPY6R	Q99463	290 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	SIX2	Q9NPC8	291 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	AASDHPPT	Q9NRN7	309 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	ARHGAP20	Q9P2F6	1191 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	SARDH	Q9UL12	918 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	HS3ST2	Q9Y278	367 aa		11.45	□□□□□ -0.58
CBWD1-222	ENST00000613508	KALRN	O60229	2985 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TBC1D3D	A0A087WVF3	549 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TBC1D3I	A0A087WXS9	549 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TBC1D3E	A0A087X179	549 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TBC1D3K	A0A087X1G2	549 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TBC1D3L	B9A6J9	549 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	FOXN3	O00409	490 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	PAGE1	O75459	146 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TBC1D3H	P0C7X1	549 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	EPHA8	P29322	1005 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	CDH5	P33151	784 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	CLCN1	P35523	988 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	KRT9	P35527	623 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	SCNN1A	P37088	669 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	ARRB1	P49407	418 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	IRAK1	P51617	712 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	CDH4	P55283	916 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	BPIFB4	P59827	614 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	UBE2H	P62256	183 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	PPP2CB	P62714	309 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	PPP2CA	P67775	309 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	IL9R	Q01113	521 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	ZNF177	Q13360	481 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	PTPN20	Q4JDL3	420 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	BRMS1L	Q5PSV4	323 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	AGBL4	Q5VU57	503 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	SFMBT2	Q5VUG0	894 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	OTUD1	Q5VV17	481 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TBC1D3G	Q6DHY5	549 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TBC1D3C	Q6IPX1	549 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	DPY19L2P1	Q6NXN4	242 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	KANSL1	Q7Z3B3	1105 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	PASD1	Q8IV76	773 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	ZNF683	Q8IZ20	524 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	SH2D3C	Q8N5H7	860 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	PDCD7	Q8N8D1	485 aa	Known RBP	11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	OR52K2	Q8NGK3	314 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	TSC1	Q92574	1164 aa		11.44	□□□□□ -0.58
CBWD1-222	ENST00000613508	RNF34	Q969K3	372 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms