RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 SUSD3Q96L08 255 aa10.66□□□□□ -0.7
PABPC1-224ENST00000610907 NUDCD1Q96RS6 583 aa10.66□□□□□ -0.7
PABPC1-224ENST00000610907 MIPEPQ99797 713 aa10.66□□□□□ -0.7
PABPC1-224ENST00000610907 MLPHQ9BV36 600 aaPredicted RBP10.66□□□□□ -0.7
PABPC1-224ENST00000610907 KIFC1Q9BW19 673 aa10.66□□□□□ -0.7
PABPC1-224ENST00000610907 NMUR2Q9GZQ4 415 aa10.66□□□□□ -0.7
PABPC1-224ENST00000610907 DENND2DQ9H6A0 471 aaPredicted RBP10.66□□□□□ -0.7
PABPC1-224ENST00000610907 CATSPERBQ9H7T0 1116 aa10.66□□□□□ -0.7
PABPC1-224ENST00000610907 AGO3Q9H9G7 860 aaKnown RBP10.66□□□□□ -0.7
PABPC1-224ENST00000610907 SNX15Q9NRS6 342 aa10.66□□□□□ -0.7
PABPC1-224ENST00000610907 COPG2Q9UBF2 871 aa10.66□□□□□ -0.7
PABPC1-224ENST00000610907 PPARGC1AQ9UBK2 798 aaKnown RBP10.66□□□□□ -0.7
PABPC1-224ENST00000610907 TAGLN3Q9UI15 199 aa10.66□□□□□ -0.7
PABPC1-224ENST00000610907 PSAT1Q9Y617 370 aa10.66□□□□□ -0.7
PABPC1-224ENST00000610907 F5H423 210 aaPredicted RBP10.65□□□□□ -0.7
PABPC1-224ENST00000610907 SPECC1L-ADORA2AF8WAN1 911 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 IRAK2O43187 625 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 JCHAINP01591 159 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 CTSHP09668 335 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 TPBGLP0DKB5 382 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 RALBP11234 206 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 CPA3P15088 417 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 ALOX15P16050 662 aaPredicted RBP10.65□□□□□ -0.7
PABPC1-224ENST00000610907 AOC1P19801 751 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 BDNFP23560 247 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 CCR1P32246 355 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 RAP1GDS1P52306 607 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 FCGRTP55899 365 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 NRG1Q02297 640 aaPredicted RBP10.65□□□□□ -0.7
PABPC1-224ENST00000610907 SREBF2Q12772 1141 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 ZBTB17Q13105 803 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 PPP2R5DQ14738 602 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 DNAL1Q4LDG9 190 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 CMPK2Q5EBM0 449 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 CD300LGQ6UXG3 332 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 DCLK2Q8N568 766 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 OR6Y1Q8NGX8 325 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 RDH11Q8TC12 318 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 PTCD2Q8WV60 388 aaKnown RBP10.65□□□□□ -0.7
PABPC1-224ENST00000610907 RILPQ96NA2 401 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 AGAP3Q96P47 875 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 FCRL5Q96RD9 977 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 MCMBPQ9BTE3 642 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 CCDC106Q9BWC9 280 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 BATF3Q9NR55 127 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 DNAJC28Q9NX36 388 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 CACNG4Q9UBN1 327 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 APOBEC2Q9Y235 224 aaKnown RBP10.65□□□□□ -0.7
PABPC1-224ENST00000610907 ANKRD6Q9Y2G4 727 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 LRRC42Q9Y546 428 aa10.65□□□□□ -0.7
PABPC1-224ENST00000610907 CCDC195A0A1B0GUA6 201 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 B2RBV5 119 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 TMEM114B3SHH9 223 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 F8W8V4 182 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 MATN3O15232 486 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 DIAPH2O60879 1101 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 ADAMTS4O75173 837 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 PGK1P00558 417 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 AMHP03971 560 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 PRKCGP05129 697 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 SLC10A3P09131 477 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 COL6A2P12110 1019 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 CST5P28325 142 aaPredicted RBP10.65□□□□□ -0.71
PABPC1-224ENST00000610907 CD52P31358 61 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 ELF1P32519 619 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 THPOP40225 353 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 HK2P52789 917 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 ABCE1P61221 599 aaKnown RBP10.65□□□□□ -0.71
PABPC1-224ENST00000610907 RPL10AP62906 217 aaKnown RBP10.65□□□□□ -0.71
PABPC1-224ENST00000610907 MPP3Q13368 585 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 UGP2Q16851 508 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 ACCSLQ4AC99 568 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 PCID2Q5JVF3 399 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 BTBD8Q5XKL5 378 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 FSTL4Q6MZW2 842 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 TIGD7Q6NT04 549 aaPredicted RBP10.65□□□□□ -0.71
PABPC1-224ENST00000610907 C16orf46Q6P387 395 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 RINLQ6ZS11 566 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 CLEC14AQ86T13 490 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 ALYREFQ86V81 257 aaKnown RBP10.65□□□□□ -0.71
PABPC1-224ENST00000610907 KCNMB4Q86W47 210 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.65□□□□□ -0.71
PABPC1-224ENST00000610907 NETO2Q8NC67 525 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 C1orf74Q96LT6 269 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 IL12RB2Q99665 862 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 PAAF1Q9BRP4 392 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 C20orf27Q9GZN8 174 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 SMOC2Q9H3U7 446 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 MRM3Q9HC36 420 aaKnown RBP10.65□□□□□ -0.71
PABPC1-224ENST00000610907 PIH1D1Q9NWS0 290 aaKnown RBP10.65□□□□□ -0.71
PABPC1-224ENST00000610907 DONSONQ9NYP3 566 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 TMEM216Q9P0N5 145 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 STOML1Q9UBI4 398 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 PCDHB8Q9UN66 801 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 DNAJC16Q9Y2G8 782 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 CDY1Q9Y6F8 540 aa10.65□□□□□ -0.71
PABPC1-224ENST00000610907 ZNF638Q14966 1978 aaKnown RBP10.64□□□□□ -0.71
PABPC1-224ENST00000610907 WASH4PA8MWX3 477 aa10.64□□□□□ -0.71
PABPC1-224ENST00000610907 TNFRSF10BO14763 440 aa10.64□□□□□ -0.71
PABPC1-224ENST00000610907 MGEA5O60502 916 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms