RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ELAVL3Q14576 367 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 SMAD1Q15797 465 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 TTC39BQ5VTQ0 682 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 CXorf57Q6NSI4 855 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 PASD1Q8IV76 773 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 OR52K2Q8NGK3 314 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 SAP25Q8TEE9 199 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 SHC3Q92529 594 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 RPRD1AQ96P16 312 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 SPAG5Q96R06 1193 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 PPP1R9BQ96SB3 815 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 FEM1AQ9BSK4 669 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 GDF3Q9NR23 364 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 ASNSD1Q9NWL6 643 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 DKK4Q9UBT3 224 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 APEX2Q9UBZ4 518 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 RWDD2AQ9UIY3 292 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 SARDHQ9UL12 918 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 VANGL2Q9ULK5 521 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 TPX2Q9ULW0 747 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 PCDHGC3Q9UN70 934 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 FREM2Q5SZK8 3169 aa13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 TP53BP1Q12888 1972 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-219ENST00000608621 NBEAQ8NFP9 2946 aa13.77□□□□□ -0.2
POLR2J3-219ENST00000608621 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 LATO43561 262 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 ATP9BO43861 1147 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 HSF2BPO75031 334 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 RTN2O75298 545 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 PON1P27169 355 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 IRAK1P51617 712 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 NXPH1P58417 271 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 PPP2CBP62714 309 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 PPP2CAP67775 309 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 CENPCQ03188 943 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 PTK2Q05397 1052 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 DNAJC3Q13217 504 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 NME3Q13232 169 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 ZNF177Q13360 481 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 DLG2Q15700 870 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 CAMK4Q16566 473 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 EXOC3L4Q17RC7 722 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 SLC45A4Q5BKX6 768 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 C11orf57Q6ZUT1 292 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 FAM183BPQ6ZVS7 135 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 C14orf80Q86SX3 495 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 PRPF39Q86UA1 669 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 PDZD3Q86UT5 571 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 EID2Q8N6I1 236 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 PDCD7Q8N8D1 485 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 CNDP2Q96KP4 475 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 SIK2Q9H0K1 926 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 KIAA1468Q9P260 1216 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 ARHGAP20Q9P2F6 1191 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 SLC25A13Q9UJS0 675 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 HS3ST4Q9Y661 456 aa13.77□□□□□ -0.21
POLR2J3-219ENST00000608621 DOCK9Q9BZ29 2069 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 ITPR1Q14643 2758 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 M0QYT0 321 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 FOXN3O00409 490 aaPredicted RBP13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 PAGE1O75459 146 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 ERBB2P04626 1255 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 ZNF18P17022 549 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 MAT2AP31153 395 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 NOS2P35228 1153 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 KRT9P35527 623 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 GGCXP38435 758 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 SLC6A3Q01959 620 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 CNTN1Q12860 1018 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 POM121L1PQ3SYA9 428 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 FAM46CQ5VWP2 391 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 NAPEPLDQ6IQ20 393 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 OLFML1Q6UWY5 402 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 DSG4Q86SJ6 1040 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 TMPRSS12Q86WS5 348 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 SPATS2Q86XZ4 545 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 MFSD2AQ8NA29 543 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 C1orf131Q8NDD1 294 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 FAM131CQ96AQ9 280 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 NOX5Q96PH1 765 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 KDM4CQ9H3R0 1056 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 VPS28Q9UK41 221 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 DNAJC12Q9UKB3 198 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 PPM1HQ9ULR3 514 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 PCDHGA1Q9Y5H4 931 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 OR51B4Q9Y5P0 310 aa13.76□□□□□ -0.21
POLR2J3-219ENST00000608621 BAHCC1Q9P281 2608 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 GTPBP10A4D1E9 387 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 MCF2LO15068 1137 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 YKT6O15498 198 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 SLC7A4O43246 635 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 PLRG1O43660 514 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 BNIP3LO60238 219 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 CLDN11O75508 207 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 JUPP14923 745 aa13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 EPHA8P29322 1005 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-219ENST00000608621 CLCN1P35523 988 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms